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GBIF.org (01 February 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.m7mc9t
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Download as TSV
-
127EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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1Bulau
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34The cryptogamy collection (PC) at the Herbarium of the Muséum national d'Histoire Naturelle (MNHN - Paris)
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1Arabian sea sediment samples with protist reads Metagenome
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1kTasmanian Natural Values Atlas
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2Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site
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6Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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28Extracellular DNA marine sediment Targeted Locus (Loci)
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2Sediment of acid mine drainage Targeted loci environmental
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88Artportalen (Swedish Species Observation System)
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1Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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2SAR amplicon from community incubated with various nanophytoplankton in microcosm
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27Norwegian Species Observation Service
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4sediment metagenome Metagenome
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303PlutoF platform reference-based occurrences
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1Donauinsel des BN bei Entau
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15Artsprosjektet 2011 - Pseudofungi
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84Tallinn Botanic Garden
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102Naturalis Biodiversity Center (NL) - Botany
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1CEPEC-Fungi - Coleção Micológica do CEPEC
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5Herbarium of University of Coimbra (COI )
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18DSMZ Collection of Filamentous Fungi and Yeasts
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820CABI Bioscience Genetic Resource Collection
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3kInvazivke - Invasive Alien Species in Slovenia
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390CSIC-Real Jardín Botánico-Colección de Hongos Histórica (MA-Funhist)
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79sediment metagenome Raw sequence reads
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4Mycological Collection - University of Washington Herbarium (WTU)
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4ARMS Jeddah sample Raw sequence reads
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3Microbial communities associated with Eurasian watermilfoil, water and sediment
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1IBF Monitoring of Plant Galls
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17Fungal specimens of Faculty of Agriculture and Life Science, Hirosaki University
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2TWIC Biodiversity Field Trip Data (1995-present)
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23Leicestershire and Rutland Fungi and Lichen Records
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6Eukaryote diversity assessment of sediments of the Western English Channel
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1ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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205Genebank, National Institute of Agrobiological Sciences
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1kInternational Barcode of Life project (iBOL)
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1Argyll Biological Records Dataset
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21BRERC species records from all years at full resolution excluding Notable Species within the last 10 years
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1Natural Resources Wales Regional Data : Mid-Wales
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1Non-target effects of Metarhizium brunneum on soil microbial communities
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178CABI Bioscience Fungus Collection
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2HUCS-Micoteca - Micoteca do Herbário da Universidade de Caxias do Sul
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2Hatikka Observation Database
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28Fungi specimen database of Kanagawa Prefectural Museum of Natural History
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4Collections and observation data National Museum of Natural History Luxembourg
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1uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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7Natural History Museum, Vienna - Herbarium W
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71CANB AVH data
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94California Current Cruise CCE-P1408 Process Cruise #6
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21Protist Diversity in the East China Sea
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5Merseyside BioBank (unverified)
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108NBIS Records to December 2016
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2Manchester Museum, University of Manchester, Botany Collection
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131Field Museum of Natural History (Botany) Fungi Collection
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2Ireland's BioBlitz
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2Surface ocean Targeted Locus (Loci)
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1Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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74Jena Microbial Resource Collection (JMRC) at Leibniz Institute for Natural Product Research and Infection Biology e.V. Hans-Knöll-Institute (HKI) and Friedrich Schiller University Jena
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45Organic agricultural field soil Raw sequence reads
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5kFungal Records Database of Britain and Ireland
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4kThe New York Botanical Garden Herbarium (NY)
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121Fungi Collection
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65Plant niche rather than soil or species shapes the microbiota
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9Bernice P. Bishop Museum
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2kGeographically tagged INSDC sequences
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3Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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181University of Tennessee Fungal Herbarium
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2WTSWW Data: All Taxa (West Wales)
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6GEO-Hauptveranstaltung (NLP Harz / Hochharz)
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4Botanical Museum, Copenhagen, Mycology Herbarium
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194Gothenburg Herbarium - General (GBIF:IH:GB:Herbarium)
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1Mycological collection of the National Museum
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61ATCC Fungi Collection Catalog
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1Herbarium of Umeå University (UME)
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7VIC - Herbário da Universidade Federal de Viçosa
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2Diet analysis of Pacific Bluefin Tuna larvae
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50Royal Botanic Garden Edinburgh Herbarium (E)
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55SOLA Raw sequence reads
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3Water Colours of Fungi by Konrad Schieferdecker at the Botanische Staatssammlung München
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2Gloucestershire Historic Wildlife Sightings prior to 1st Jan 2000
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9North Sea plastic incubation and reference communities, raw sequence reads
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37Duke University, Herbarium Fungal Collection
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131Danish Mycological Society, fungal records database
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41LSUM Bernard Lowy Mycological Herbarium at Louisiana State University - Fungi
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6kLund Botanical Museum (LD)
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3Marine metagenome ICM_JRV
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2SER Species-based Surveys
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12Environmental eukaryotes Metagenome
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3Saltern of Margherita di Savoia Metagenome
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3University of Tartu Natural History Museum and Botanical Garden Mycological Collections
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16Suffolk Biodiversity Information Service (SBIS) Dataset
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4The Fungal, Lichen and Plant Collections at the Herbarium Marburgense
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115anchialine metagenome Raw sequence reads
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1Amplicon-Based Illumina Sequencing Reveals High Diversity of Phytoplankton in the Coastal Waters of Qinhuangdao
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195Nahant Collection
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2Welsh Invertebrate Database (WID)
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24Mycology herbarium TRH, NTNU University Museum
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1rDNA amplicon sequencing of Western North Atlantic microbial community
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1Fiocruz/CCFF - Coleção de Culturas de Fungos Filamentosos
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5Zooplankton communities in the coastal water of northeastern Hokkaido
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47Mycology herbarium, Oslo (O), Natural History Museum, University of Oslo
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1Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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250Masaryk University - Herbarium BRNU
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3Deposit_of_Patent_Bio-Material_in_BCRC
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1FLOR - Herbário do Departamento de Botânica da Universidade Federal de Santa Catarina
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1Shropshire Ecological Data Network database
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40Rotherham Biological Records Centre - Non-sensitive Records from all taxonomic groups
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1kEukaryotic diversity in Central Park
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5RHS monitoring of native and naturalised plants and animals at its gardens and surrounding areas
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9Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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1Tag der Artenvielfalt im Taubental
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71The Fungal Collection at the Botanische Staatssammlung München
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205SEWBReC Fungi (South East Wales)
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11Lichens at Herbarium Berolinense, Berlin (B)
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4There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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30SEWBReC Algae and allied species (South East Wales)
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86naturgucker
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1Marine metagenomes from the bioGEOTRACES project
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1ALCB herbarium - Universidade Federal da Bahia - Herbário Virtual REFLORA
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2Microbial communities in the ocean Raw sequence reads
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1kEstonian University of Life Sciences Institute of Agricultural and Environmental Sciences Department of Plant Protection
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3Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing
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164iNaturalist Research-grade Observations
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8Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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47PERTH AVH data
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345Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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1Miscellaneous records held by BIS
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2ALCB - Herbário Alexandre Leal Costa
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2Temporal sampling of marine metagenomes from Station ALOHA and BATS
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26IPA - Herbário - IPA Dárdano de Andrade Lima
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3Marine metagenome ICM_WBS
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4White sea picoplankton Metagenome
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166Harvard University Herbaria: All Records
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20HO AVH data
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15All taxa records for Leicestershire and Rutland
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1Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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1kRecords of the Queensland Plant Pathology Herbarium
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9Royal Ontario Museum Fungarium (TRTC)
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42marine sediment metagenome Metagenome
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1Biological rejuvenation of iron oxides in bioturbated marine sediments
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4Herbarium (AMNH)
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166University of British Columbia Herbarium (UBC) - Algae Collection
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17Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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2Database on Forest Disturbances in Europe
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1Schwanheimer Wald
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1ALA species sightings and OzAtlas
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1Löydös Open Invasive Alien Species Observations
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1Seawater metagenome Targeted loci environmental
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74Rutgers University, Chrysler Herbarium
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35CBS Filamentous Fungi Database
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1kMarine metagenomes Metagenome
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20New Zealand Biodiversity Recording Network
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2soil bacteria and fungi Targeted loci environmental
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1Red Sea Zooplankton Raw sequence reads
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14Red Sea microbial plankton Raw sequence reads
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4Merseyside BioBank Active Naturalists (unverified)
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1Schatzinsel Wangerooge
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12PACA-Fungi - Herbarium Anchieta - Fungi Rickiani
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20Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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1NRW Regional Data: all taxa (excluding sensitive species), West Wales
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2Nitrate-storing microorganisms in sediments of the Bornholm Basin
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239Fungi Collection in BCRC
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33Research on Airborne Ice Nucleating Species
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13DSMZ Fungi
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111Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
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1SCHEMA_Sediment
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21Marine sediment metagenome raw sequence reads
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5kThe Fungal Collection at the Senckenberg Museum für Naturkunde Görlitz
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1South China Sea interfaces 16S amplicon sequencing
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1Marine metagenome ICM_GPS
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6Sediment Metagenome Raw sequence reads
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1MEL AVH data
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514International Collection of Microorganisms from Plants (ICMP)
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1Geotraces Raw sequence reads
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1Whale fall
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32NE Scotland fungus and lichen records 1800-2010
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12R-Fungi - Herbário do Museu Nacional
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25Cercle des mycologues de Montréal Fungarium (CMMF)
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209Banc de dades de biodiversitat de Catalunya-FungaCat
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2Polymetallic nodule field Targeted loci environmental
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2Eukaryotic protists Metagenome
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2Metazoan sequencing
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38Steiermärkisches Landesmuseum Joanneum - Herbarium GJO
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2Uncultured eukaryotes Targeted Locus (Loci)
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91SP-Fungi - Maria Eneyda Pacheco Kauffmann Fidalgo
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31IFO Filamentous Fungi
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386SA Flora (BDBSA)
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734CSIC-Real Jardín Botánico-Colección de Hongos (MA-Fungi)
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1Tucurui_Metagenoma_MGRAST
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9Herbarium specimens of Université de Montpellier 2, Institut de Botanique (MPU))
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1kMeise Botanic Garden Herbarium (BR)
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1Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.
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1MELU AVH data
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1Patrick Roper’s Notebooks
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10DAR AVH data
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20National Trust Species Records
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261OEH Atlas of NSW Wildlife
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1marine metagenome Raw sequence reads
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1kUniversity of Vienna, Institute for Botany - Herbarium WU
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6Fungi and Lichens, Outer Hebrides
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490Fungal Biodiversity Centre (CBS) - Fungi strains
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2LERN Records
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24Utah State University, Intermountain Herbarium
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1GEO Biodiversity Day
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10Miscellaneous records held on the Cofnod database
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11Soil metagenome from healthy and unhealthy agricultural soil
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24Fongs d'Andorra
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1Magdalen Island Spatio Temporal (MIST) Raw sequence reads
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1EDIT - ATBI in Mercantour/Alpi Marittime (France/Italy)
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3Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 sequencing-by-synthesis
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35Brown University Herbarium
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131Botany (UPS)
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1DSMZ Bacteria
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1Observation.org, Nature data from around the World
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713Fungus Collections at Staatliches Museum für Naturkunde Karlsruhe (Herbarium KR)
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3Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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33Water and Sediment samples Targeted loci environmental
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1The Indigo Project: a global citizen science Ocean survey
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128Bell Museum fungi
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6Colección Micológica - Herbario Criptogámico LIL - FML
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45Temporal variation in pesticide biodegradation
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36University of Graz, Institute of Plant Sciences - Herbarium GZU
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4CECT Spanish Type Culture Collection(Fungi)
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56MPM Milwaukee Public Museum Herbarium
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63Marine Water Column Samples Targeted loci environmental
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24INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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1kUniversity of Michigan Herbarium
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835New Zealand Fungal and Plant Disease Collection (PDD)
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7Protists community in the southern East China Sea
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4kPhytopathogenic Fungi Observed by Hans and Hanna Doppelbaur
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2Raw sequence reads from soil relic DNA study
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12Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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3Diet analysis of Japanese sardine and Pacific round herring larvae
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1Marine sediment microbial communities in the presence of macrophytes
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4sediment metagenome Metagenome
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5Herbarium Senckenbergianum (FR) - Fungi
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2Oskarshamn herbarium (OHN)
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1Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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440Fungal Specimens of National Museum of Nature and Science (TNS)
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419Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Mycological Herbarium
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112Records of the DAFWA Plant Pathology Collection
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1Photographs of higher plants, mosses, fungi, lichens, and algae
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10The Exsiccatal Series "Triebel, Microfungi exsiccati"
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375URM - Herbário Pe. Camille Torrand
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1Merseyside BioBank (verified)
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22Biodiversitätsdatenbank Salzburg
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21HBRG Fungus, Lichen & Lower Plants Dataset
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52CARBOM cruise 2013 flow cytometry sorted phytoplankton
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1University of British Columbia Herbarium (UBC) - Fungi Collection
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2sediment metagenome Raw sequence reads
-
11Microbial Processes and Biodiversity: OCEAN
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1kFungi (S)
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59PaDIL
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2Metagenomic investigation of six depths from the anchialine Bundera sinkhole
-
1PNG Invasive Species
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1NEW-2
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2Sea ice and seawater Raw sequence reads