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SAR amplicon from community incubated with various nanophytoplankton in microcosm

Dataset homepage

Citation

MGnify (2019). SAR amplicon from community incubated with various nanophytoplankton in microcosm. Sampling event dataset https://doi.org/10.15468/5tuxth accessed via GBIF.org on 2022-07-04.

Description

To address the impact of prey (bottom-up) on protist communities, we combine insights from two methods DGGE to assess abundant ciliates, and HTS sequencing of SAR (Stramenopila, Alveolata, Rhizaria) communities in marine microcosms. Here are the resulting read generated for this project with our SAR primers.

Sampling Description

Sampling

To address the impact of prey (bottom-up) on protist communities, we combine insights from two methods DGGE to assess abundant ciliates, and HTS sequencing of SAR (Stramenopila, Alveolata, Rhizaria) communities in marine microcosms. Here are the resulting read generated for this project with our SAR primers.

Method steps

  1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
Smith College
metadata author
Smith College
administrative point of contact
Smith College
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