Marine metagenome ICM_GPS

doi:10.15468/0ipxqc

Marine metagenome ICM_GPS

Citation

MGnify (2018). Marine metagenome ICM_GPS. Sampling event dataset https://doi.org/10.15468/0ipxqc accessed via GBIF.org on 2024-12-12.

Description

Global Protistan Survey: Comparison of High-Throughput ''454'' Pyrosequencing vs. ''Deep'' Sanger Sequencing of 18S rRNA genes in Arctic (Chukchi Sea) and Antarctic (Ross Sea) ecosystems.

Sampling Description

Sampling

Global Protistan Survey: Comparison of High-Throughput ''454'' Pyrosequencing vs. ''Deep'' Sanger Sequencing of 18S rRNA genes in Arctic (Chukchi Sea) and Antarctic (Ross Sea) ecosystems.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Lie AA, Liu Z, Hu SK, Jones AC, Kim DY, Countway PD, Amaral-Zettler LA, Cary SC, Sherr EB, Sherr BF, Gast RJ, Caron DA. 2014. Investigating microbial eukaryotic diversity from a global census: insights from a comparison of pyrotag and full-length sequences of 18S rRNA genes. Appl Environ Microbiol vol. 80 - DOI:10.1128/aem.00057-14

Contacts

originator
MBL

metadata author
MBL

administrative point of contact
MBL