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GBIF.org (01 October 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.3b8m2w
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1Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015
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3International Collection of Microorganisms from Plants (ICMP)
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4Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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1Antarctic Lakes Brine Raw sequence reads
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5Biological Impacts of Ocean Acidification
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1Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns
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616S data from: Diversity of Pico- to Mesoplankton along the 2000 km Salinity Gradient of the Baltic Sea (Hu et al. 2016)
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2Colección de Microorganismos-Pontificia Universidad Javeriana
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1Polymetallic nodule field Targeted loci environmental
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1microbial communities in long-term e-waste contaminated river sediments
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3Surfactant-associated bacteria in the near-surface layer of the ocean
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1Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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1eDNA_Subseafloor
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316S rRNA amplicon sequences of Baltic Sea bacterioplankton
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1Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental
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1Tucurui_Metagenoma_MGRAST
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1PREsediment Targeted Locus (Loci)
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416S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper
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1Queensland Marine Sediment
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36Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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4Marine sediment amplicon Targeted loci environmental
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2Microbial diversity before and after tidal re-instatement
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12Compost microbe establishment and growth in agricultural soils
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1Camargue soil and sediment 16S community profiling
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2Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study)
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216S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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21Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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2Collective List of Descriptions about Bacterial Isolates from Korea
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172INSDC Host Organism Sequences
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1coastal sediment diversity study
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1Bacteria community in the southern East China Sea
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1marine sediment metagenome Raw sequence reads
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2Coastal Sediment Bacterial Community Alterations in Association with Sudden Vegetation Dieback
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19DSMZ Bacteria
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1Study of microbial diversity from sediment samples of the SaiGon-DongNai system
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1Aquifer sediment nitrate reducing community change
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7Depth profile of ancient sediments
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2Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads
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3Atlantic salmon microbiota
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2It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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3IFO Bacteria database
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8Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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2Lake sediment sequencing
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3The Indigo Project: a global citizen science Ocean survey
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716S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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13Bacteria Collection in BCRC
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3Mid-Atlantic Ridge sediment Raw sequence reads
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2Temporal variation in pesticide biodegradation
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7Trichodesmium spiralis associated microbiome Targeted loci
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21North Pacific Subtropical Gyre Microbial Community
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1Seawater Targeted Locus (Loci)
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1Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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42Macroalgal Morphology affects composition and settlement of microbial communities
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7Salt Marsh Sediments Raw sequence reads
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8Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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1Microbial associations in temperate marine copepods from the Gulf of Maine
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27Prokaryotic community response to microalgal lysates
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10Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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1microbial diversity Raw sequence reads
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1Svalbard Targeted Locus (Loci)
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8Raw sequence reads from soil relic DNA study
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3sea water bacteria Raw sequence reads
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2Rifle sediment bacterial community Targeted Locus (Loci)
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1California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental
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1Bacterial Diversity in the East China Sea
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3Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
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1Oceanic microplankton do not adhere to the latitudinal diversity gradient
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11Japan Collection of Microorganisms(Bacteria)
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6magnetite Targeted Locus (Loci)
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1Equatorial Pacific Ocean Targeted loci environmental
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511INSDC Sequences
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2Localized impact of aquaculture effluent on Red Sea coral reef water nutrients and microorganisms
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2Bacteria exposure experiment North Sea
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1Caracterización de la población de bacteriófagos asociados a los principales phyla bacterianos, residentes en la superficie epidérmica de Bolitoglossa nicefori (Caudata: Plethodontidae) de la Cordillera Oriental de Colombia
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2Microbial Processes and Biodiversity: OCEAN
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20EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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3A diverse and metabolically active microbial community persists in deep subsurface clay borehole water
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1marine sediment metagenome Metagenomic assembly
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1Metagenome from mudbank Area,Alappuzha Kerala India
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2Algae - Domestic Bacteria (KIDR-AG)
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2the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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3FBIP: Diversities of microbiomes from South African arid and natural soils
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52Reciprocal transplantation experiment of salt marsh sediments Targeted loci
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3Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments
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13IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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2CCA_pathobiome
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52Little Sippewissett Marsh Targeted Locus (Loci)
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15Microbial populations of Lascauxs Apse in relation to collembola and black stains on cave walls.
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7Marine Bacteria 16S V4 Raw sequence reads
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1sediment metagenome Metagenome
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1Aarhus Bay sediment PCR amplified product sequencing
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1Marine sediment Raw sequence reads
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23Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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2Benham Rise 16S raw sequence reads
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1Oil-water intephase microbial community analysis Raw sequence reads
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116S amplicons New Zealand agricultural soils
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70marine metagenome Metagenome
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7Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion
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17Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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7A practical introduction to microbial molecular ecology through the use of iChips
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2Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO
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2Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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1Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
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1seawater metagenome Genome sequencing and assembly
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7Sediment metagenome
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54Microbial communities associated with Eurasian watermilfoil, water and sediment
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2PAH-contaminated sediment from the Lagos Lagoon, Nigeria
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45Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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1Sediment bacterial 16S in Hachiro polder.
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2Mediterranean Contaminated Pelagic communities
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1ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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2MeHg Coal Ash
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10Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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5Non-target effects of Metarhizium brunneum on soil microbial communities
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2CABI Bioscience Fungus Collection
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3marine Archaea metagenome
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3Microbial biogeography of 925 geothermal springs in New Zealand
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57Centre de Ressources Biologiques de l'Institut Pasteur
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3Pelagic Gulf of Mexico Targeted loci environmental
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1Cepario del Laboratorio de Microbiología y Mutagénesis Ambiental de la UIS
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1Assessing the microbial diversity in Cape Comorin ocean water
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1Marine subseafloor sediment Targeted Locus (Loci)
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3Nutrient addition mesocosm experiment Targeted Locus (Loci)
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1Marine methane seep Targeted Locus (Loci)
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2marine metagenome
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9Response of soil bacteria to anthropogenic soil variables at large spatial scales
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74Zostera Marina Ammonification environmental
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4Tyne oil spill snorkels Raw sequence reads
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15Organic agricultural field soil Raw sequence reads
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3Raw sequence reads
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6Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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1Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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1Temporal dynamics of bacterioplankton community in response to excessive nitrate loading in the oligotrophic coastal water
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1Eastern offshore environmental monitoring of Krishna Godavari Basin Bay of Bengal 2013-2016, Funded by: ONGC India
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2Prokaryotic community structure in the deep Southwest Indian Ocean with an emphasis on actinobacteria Targeted Locus (Loci)
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1Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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1Spatial Variation of Coastal Bacterioplankton Community along a Nitrogen and Phosphorus Co-pollution Gradient
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2Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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1Phaeobacter inhibens host-attached and free-living communities
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4Sea spray aerosols at Three California Beaches
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1SOLA Raw sequence reads
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12PCB-contaminated sediment Genome sequencing
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4Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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216S rRNA genes Random survey
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6Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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3Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Caribbean Sea near Curacao (including saline pond samples in Curacao) 2015
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3Evidence of bacterioplankton community adaption in responses to long-term mariculture disturbance
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2microbes in coastal sea
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3Microbial biogeography of French caves
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25Saltern of Margherita di Savoia Metagenome
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1Caspian Sea Sediment - 16S Survey Targeted Locus (Loci)
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65DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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4Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation
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3Nahant Collection
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9US East Coast Salt Marshes Targeted Locus (Loci)
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2aquatic bacterial metagenome Raw sequence reads
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1Biogeography of subsurface prokaryotic communities along with sediment deposition of sediments
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13Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils
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1Sediment sample Metagenome
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1rDNA amplicon sequencing of Western North Atlantic microbial community
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1Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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3marine sediment metagenome Targeted loci environmental
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2Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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1Abalone seed nursing ecosystem Metagenome
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2Microbial populations of Lascauxs Apse in relation to collembola and black stains on cave walls.
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1Deposit_of_Patent_Bio-Material_in_BCRC
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116S rRNA Analysis of Osaka Bay Microbiomes
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11Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem
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7uncultured prokaryote Targeted loci environmental
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7VKM Microbial Cultures from Former USSR
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3Deep mud-volcano biosphere in the Nankai accretionary wedge
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1Eukaryotic diversity in Central Park
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7Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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2CECT Spanish Type Culture Collection(Bacteria)
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2Bacterial community structure and their predicted functions in coastal sediments
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1Marine metagenomes from the bioGEOTRACES project
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69INSDC Environment Sample Sequences
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2Bacteria in domestic water-storage containers with or without mosquito larvae
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10Microbial communities in the ocean Raw sequence reads
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11Community structure of Archaea in the western North Pacific and the Arctic Ocean
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1Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater
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1Uncultered bacterium Targeted Locus (Loci)
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113BCCM/LMG Bacteria collection
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33DSMZ Prokarya Collection Catalogue
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3microbial community diversities of Tuosu Lake
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10marine metagenome Metagenome
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34Coral
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5Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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3Amino acid addition experiment Metagenome
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116S rDNA amplicon of Bacteria and Archaea Metagenome
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13Soil Microbial communities from weed germination bioassay targeted loci environmental
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2Comparison of marine sediments from the Beguela upwelling zone
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2Temporal sampling of marine metagenomes from Station ALOHA and BATS
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5Soil marker gene sequences across the Nutrient Network
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1soil metagenome Raw sequence reads
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1environmental sample sequencing
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2the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads
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1sediment metagenome Raw sequence reads
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4Microbial diversity of marine sediments
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7MGYS00005313
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1Bacterial diversity and community composition in grassland and forest soils of the German Biodiversity Exploratories
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8MICROBIS database
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76Sediment surface microbial community changes due to phytoplankton addition
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2Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments
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1Microbial communities in the phycosphere environment
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5Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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5Seawater metagenome Targeted loci environmental
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7Effects of triclosan on bacterial community composition in natural seawater microcosms
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1Soil bacterial diversity is associated with human population density in urban greenspaces
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2Indian_sediments
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51Soil microbial distribution
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5flora & fauna(NIBR)
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2Bacterial community of river sediment enriched with polycyclic aromatic hydrocarbons
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1marine sediment metagenome Targeted loci environmental
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410Marine metagenomes Metagenome
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13Nuunat- ORMS formation during oil biodegradation at low temperature
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1soil bacteria and fungi Targeted loci environmental
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1Microbial ecology of bacteiral community in sediment from adjacent waters of Rushan Bay
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5Red Sea microbial plankton Raw sequence reads
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1Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay
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1Bacterial community composition in the naturally iron-fertilized region off Kerguelen Island (Southern Ocean). Targeted Locus (Loci)
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5microbial community composition of marine water and sediment
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17Bacterial Biogeography of Coastal Water in the Northern East China Sea
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1Pelagic sediment metagenome of Gulf of Khambhat
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6Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
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28Japan Collection of Microorganisms, RIKEN BioResource Center
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13ATCC Bacteria Collection Catalog
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3marine sediment metagenome Targeted loci environmental
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3Marine sediment metagenome
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6CCUG Microorganisms databases(Bacteria)
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1Sediment Metagenome Raw sequence reads
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2Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci)
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1freshwater sediment metagenome Metagenome
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1Bacterial 16S rRNA and fungal ITS Metagenome
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2marine sediment metagenome Targeted loci environmental
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17Niche partitioning of methanotrophs in stratified lakes
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2Spatial and environmental variation in whole microbial communities in Fildes Bay, King George Island, Antarctica Raw sequence reads