Indian_sediments

doi:10.15468/3rxsye

Indian_sediments

Citation

MGnify (2019). Indian_sediments. Sampling event dataset https://doi.org/10.15468/3rxsye accessed via GBIF.org on 2020-01-18.

Description

Shotgun metagenomics - sediments contaminated by pharmaceutical discharges. This project contains 11 samples (paired-end 101 bp metagenomic libraries) and sequenced on Illumina HiSeq2000 platform. The raw sequence data of read 1 and read 2 (paired-end) from each metagenome has been uploaded individually.

Sampling Description

Sampling

Shotgun metagenomics - sediments contaminated by pharmaceutical discharges. This project contains 11 samples (paired-end 101 bp metagenomic libraries) and sequenced on Illumina HiSeq2000 platform. The raw sequence data of read 1 and read 2 (paired-end) from each metagenome has been uploaded individually.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
University of Gothenburg

metadata author
University of Gothenburg

administrative point of contact
University of Gothenburg