Indian_sediments
Citation
MGnify (2019). Indian_sediments. Sampling event dataset https://doi.org/10.15468/3rxsye accessed via GBIF.org on 2025-05-17.Description
Shotgun metagenomics - sediments contaminated by pharmaceutical discharges. This project contains 11 samples (paired-end 101 bp metagenomic libraries) and sequenced on Illumina HiSeq2000 platform. The raw sequence data of read 1 and read 2 (paired-end) from each metagenome has been uploaded individually.Sampling Description
Sampling
Shotgun metagenomics - sediments contaminated by pharmaceutical discharges. This project contains 11 samples (paired-end 101 bp metagenomic libraries) and sequenced on Illumina HiSeq2000 platform. The raw sequence data of read 1 and read 2 (paired-end) from each metagenome has been uploaded individually.Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
Contacts
originatorUniversity of Gothenburg
metadata author
University of Gothenburg
administrative point of contact
University of Gothenburg