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GBIF.org (03 November 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.knkxq3
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Download as TSV
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84Jena Microbial Resource Collection (JMRC) at Leibniz Institute for Natural Product Research and Infection Biology e.V. Hans-Knöll-Institute (HKI) and Friedrich Schiller University Jena
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1Geotraces Raw sequence reads
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2Dr Mary Gillham Archive Project
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2Cercle des mycologues de Montréal Fungarium (CMMF)
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77The New York Botanical Garden Herbarium (NY)
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660Fungal Records Database of Britain and Ireland
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264Banc de dades de biodiversitat de Catalunya-FungaCat
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1Polymetallic nodule field Targeted loci environmental
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185Plant niche rather than soil or species shapes the microbiota
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2Records of the Western Australian Mycology Culture Collection
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2Bernice P. Bishop Museum
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11University of Tennessee Fungal Herbarium
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2Botanical Museum, Copenhagen, Mycology Herbarium
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1Japan Collection of Microorganisms(Fungi)
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1IFO Filamentous Fungi
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4CSIC-Real Jardín Botánico-Colección de Hongos (MA-Fungi)
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1Mycological collection of the National Museum
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48ATCC Fungi Collection Catalog
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6Meise Botanic Garden Herbarium (BR)
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3Herbarium of Umeå University (UME)
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1Queensland Marine Sediment
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1Patrick Roper’s Notebooks
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2DAR AVH data
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5Diet analysis of Pacific Bluefin Tuna larvae
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2Royal Botanic Garden Edinburgh Herbarium (E)
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2National Trust Species Records
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6Sea spray aerosols at Three California Beaches
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3SOLA Raw sequence reads
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7Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular
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37Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study)
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1Southern Ocean microorganisms Targeted Locus (Loci)
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2The Masayo Kato Fungi Collection, The University Museum, The University of Tokyo.
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2Gloucestershire Historic Wildlife Sightings prior to 1st Jan 2000
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4Duke University, Herbarium Fungal Collection
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11North Sea plastic incubation and reference communities, raw sequence reads
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23Danish Mycological Society, fungal records database
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5Lund Botanical Museum (LD)
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195INSDC Host Organism Sequences
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50Fungal Biodiversity Centre (CBS) - Fungi strains
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5LERN Records
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1Marine metagenome ICM_JRV
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1Intermountain Herbarium (fungi, not lichens), Utah State University
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2Fungal diversity in Sanya mangrove sediments, China
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1Metabarcoding surveys of the Arctic marine environment
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1SER Species-based Surveys
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5Microbial biogeography of French caves
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5Soil metagenome from healthy and unhealthy agricultural soil
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3Environmental eukaryotes Metagenome
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21Canberra Nature Map
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2The Fungarium of Yugra State University
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5Fongs d'Andorra
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1University of Tartu Natural History Museum and Botanical Garden Mycological Collections
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1Estonian Naturalists’ Society
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7Suffolk Biodiversity Information Service (SBIS) Dataset
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1Brown University Herbarium
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2The Fungal, Lichen and Plant Collections at the Herbarium Marburgense
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9anchialine metagenome Raw sequence reads
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58Nahant Collection
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1Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils
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516Observation.org, Nature data from around the World
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2Fiocruz/CCFF - Coleção de Culturas de Fungos Filamentosos
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2Mycology herbarium, UiT Tromsø Museum
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2Fungus Collections at Staatliches Museum für Naturkunde Karlsruhe (Herbarium KR)
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23Water and Sediment samples Targeted loci environmental
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8Zooplankton communities in the coastal water of northeastern Hokkaido
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1Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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11Swiss National Fungi Databank
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4The Indigo Project: a global citizen science Ocean survey
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2Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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8Bell Museum fungi
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8Temporal variation in pesticide biodegradation
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3Metagenomic community analysis of marine zooplankton using two plankton nets
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20University of Graz, Institute of Plant Sciences - Herbarium GZU
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1Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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6Macroalgal Morphology affects composition and settlement of microbial communities
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257Biome of Australia Soil Environments
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9Mycology Collection Catalogue, Royal North Shore Hospital
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5VKM Microbial Cultures from Former USSR
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3Herbarium GB, University of Gothenburg
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40Marine Water Column Samples Targeted loci environmental
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22INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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1Shropshire Ecological Data Network database
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6Rotherham Biological Records Centre - Non-sensitive Records from all taxonomic groups
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72University of Michigan Herbarium
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37New Zealand Fungal and Plant Disease Collection (PDD)
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7Protists community in the southern East China Sea
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602Eukaryotic diversity in Central Park
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1Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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1Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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8Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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10SEWBReC Fungi (South East Wales)
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4Diet analysis of Japanese sardine and Pacific round herring larvae
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1There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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116naturgucker
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7Marine metagenomes from the bioGEOTRACES project
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4sediment metagenome Metagenome
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1INSDC Environment Sample Sequences
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2Herbarium Senckenbergianum (FR) - Fungi
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16Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Department of Plant Protection
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9Fungal Specimens of National Museum of Nature and Science (TNS)
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1Microbial eukaryote 454 Roche sequencing in estuarine ecosystems
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15CEDaR Online Recording
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820iNaturalist Research-grade Observations
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2Photographs of higher plants, mosses, fungi, lichens, and algae
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1Fungal literature records database of the Northern West Siberia (Russia)
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8URM - Herbário Pe. Camille Torrand
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1Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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4HBRG Fungus, Lichen & Lower Plants Dataset
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423Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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3CARBOM cruise 2013 flow cytometry sorted phytoplankton
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1University of British Columbia Herbarium (UBC) - Fungi Collection
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52INSDC Sequences
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13Leicestershire and Rutland Environmental Records Centre records 2010-2014
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1Fungal occurrences from the Basque Country and neighbouring areas: ARAN-Fungi
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3Temporal sampling of marine metagenomes from Station ALOHA and BATS
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1Microbial Processes and Biodiversity: OCEAN
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5White sea picoplankton Metagenome
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19Fungi (S)
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86EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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16Soil marker gene sequences across the Nutrient Network
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3Leicestershire and Rutland Environmental Records Centre records 2000-2009
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1Marine sediment metagenome ICM_DSE
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13Harvard University Herbaria: All Records
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40All taxa records for Leicestershire and Rutland
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3Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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16marine sediment metagenome Metagenome
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1Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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1Herbarium (AMNH)
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23Extracellular DNA marine sediment Targeted Locus (Loci)
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5Sediment of acid mine drainage Targeted loci environmental
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1marine sediment Raw sequence reads
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58Artportalen (Swedish Species Observation System)
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7Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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48Microbial populations of Lascauxs Apse in relation to collembola and black stains on cave walls.
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5PlutoF platform reference-based occurrences
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38Norwegian Species Observation Service
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3Microbial communities in estuarine sediments
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10sediment metagenome Metagenome
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5Earth Guardians Weekly Feed
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11Naturalis Biodiversity Center (NL) - Botany
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4台灣真菌地理分布系統資料庫之建制與應用(1/4)
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2DSMZ Collection of Filamentous Fungi and Yeasts
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42CABI Bioscience Genetic Resource Collection
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2Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.
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1ALA species sightings and OzAtlas
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1BIOWIDE eDNA Fungi dataset
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1CSIC-Real Jardín Botánico-Colección de Hongos Histórica (MA-Funhist)
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21sediment metagenome Raw sequence reads
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13Rutgers University, Chrysler Herbarium - Mycology Collection
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2ARMS Jeddah sample Raw sequence reads
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5Microbial communities associated with Eurasian watermilfoil, water and sediment
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34CBS Filamentous Fungi Database
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220Marine metagenomes Metagenome
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1Microeukaryotes in metagenomic survey of ancient Siberian permafrost
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2soil bacteria and fungi Targeted loci environmental
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1Red Sea Zooplankton Raw sequence reads
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1Red Sea microbial plankton Raw sequence reads
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1DSW-2
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11Merseyside BioBank Active Naturalists (unverified)
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128Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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1PACA-Fungi - Herbarium Anchieta - Fungi Rickiani
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2Leicestershire and Rutland Environmental Records Centre records 2015-2019
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2Eukaryote diversity assessment of sediments of the Western English Channel
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1Nitrate-storing microorganisms in sediments of the Bornholm Basin
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5Research on Airborne Ice Nucleating Species
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1Fungi Collection in BCRC
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61International Barcode of Life project (iBOL)
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4DSMZ Fungi
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10Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
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1Japan Collection of Microorganisms, RIKEN BioResource Center
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1BRERC species records from all years at full resolution excluding Notable Species within the last 10 years
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14Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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284CABI Bioscience Fungus Collection
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2Marine sediment metagenome raw sequence reads
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1Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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1Fungi of parks, forests and reserves of New Jersey, 2018
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1South China Sea interfaces 16S amplicon sequencing
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6Fungi specimen database of Kanagawa Prefectural Museum of Natural History
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5Sediment Metagenome Raw sequence reads
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1Comparison of copper contaminated soils, with similar uncontaminated controls.
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2Assessing the microbial diversity in Cape Comorin ocean water
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1USS-2
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5California Current Cruise CCE-P1408 Process Cruise #6
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5Protist Diversity in the East China Sea
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1Merseyside BioBank (unverified)
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68NBIS Records to December 2016
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2Field Museum of Natural History (Botany) Fungi Collection
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1Ireland's BioBlitz
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2Nutrient addition mesocosm experiment Targeted Locus (Loci)
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9Sea ice and seawater Raw sequence reads