Metagenomic community analysis of marine zooplankton using two plankton nets
Citation
MGnify (2018). Metagenomic community analysis of marine zooplankton using two plankton nets. Sampling event dataset https://doi.org/10.15468/0np3r2 accessed via GBIF.org on 2024-11-03.Description
Metagenomic analysis was conducted to evaluate effects of plankton nets on marine zooplankton community. Zooplankton samples were collected in the coastal water off Japan, using two types of plankton nets. PCR was performed to amplify 18S V7-V9 regions, and the 454-pyrosequencing run was carried out .Sampling Description
Sampling
Metagenomic analysis was conducted to evaluate effects of plankton nets on marine zooplankton community. Zooplankton samples were collected in the coastal water off Japan, using two types of plankton nets. PCR was performed to amplify 18S V7-V9 regions, and the 454-pyrosequencing run was carried out .Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
Contacts
originatorFISHRA
metadata author
FISHRA
administrative point of contact
FISHRA