Jena Microbial Resource Collection (JMRC) at Leibniz Institute for Natural Product Research and Infection Biology e.V. Hans-Knöll-Institute (HKI) and Friedrich Schiller University Jena

Whale fall

Cercle des mycologues de Montréal Fungarium (CMMF)

The New York Botanical Garden Herbarium (NY)

Fungal Records Database of Britain and Ireland

Polymetallic nodule field Targeted loci environmental

Plant niche rather than soil or species shapes the microbiota

Bernice P. Bishop Museum

KUBI Paleobotany Collection

Steiermärkisches Landesmuseum Joanneum - Herbarium GJO

University of Tennessee Fungal Herbarium

SP-Fungi - Maria Eneyda Pacheco Kauffmann Fidalgo

Botanical Museum, Copenhagen, Mycology Herbarium

Japan Collection of Microorganisms(Fungi)

CSIC-Real Jardín Botánico-Colección de Hongos (MA-Fungi)

Impact of Plant Development on Structure and Function of Rhizosphere Microbial Community associated with Groundnut (Arachis hypogaea L.)

Tucurui_Metagenoma_MGRAST

ATCC Fungi Collection Catalog

Microbial eukaryotes

Herbarium specimens of Université de Montpellier 2, Institut de Botanique (MPU))

Meise Botanic Garden Herbarium (BR)

DAR AVH data

Abundance, diversity and distribution of Legionellales in wet environments in Sweden

Diet analysis of Pacific Bluefin Tuna larvae

Fringing reef Metagenome

Sea spray aerosols at Three California Beaches

SOLA Raw sequence reads

Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study)

Tartu Botanical Garden Root and Leaf Endophytes

Duke University, Herbarium Fungal Collection

LSUM Bernard Lowy Mycological Herbarium at Louisiana State University - Fungi

Danish Mycological Society, fungal records database

Lund Botanical Museum (LD)

INSDC Host Organism Sequences

Fungi and Lichens, Outer Hebrides

Fungal Biodiversity Centre (CBS) - Fungi strains

Intermountain Herbarium (fungi, not lichens), Utah State University

Fungal diversity in Sanya mangrove sediments, China

Metabarcoding surveys of the Arctic marine environment

Microbial biogeography of French caves

Soil metagenome from healthy and unhealthy agricultural soil

Environmental eukaryotes Metagenome

Brown University Herbarium

Botany (UPS)

anchialine metagenome Raw sequence reads

Nahant Collection

Mycology herbarium TRH, NTNU University Museum

Mycology herbarium, UiT Tromsø Museum

Fungus Collections at Staatliches Museum für Naturkunde Karlsruhe (Herbarium KR)

Water and Sediment samples Targeted loci environmental

Zooplankton communities in the coastal water of northeastern Hokkaido

Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis

Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean

The Nanoeukaryotic plankton Raw sequence reads

Swiss National Fungi Databank

The Indigo Project: a global citizen science Ocean survey

DOS-1

Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean

Bell Museum fungi

Coleccion Micologica

Temporal variation in pesticide biodegradation

University of Graz, Institute of Plant Sciences - Herbarium GZU

Macroalgal Morphology affects composition and settlement of microbial communities

Biome of Australia Soil Environments

CECT Spanish Type Culture Collection(Fungi)

uncultured prokaryote Targeted loci environmental

MPM Milwaukee Public Museum Herbarium

18S Monterey Bay Time Series: an eDNA data set from Monterey Bay, California, including years 2006, 2013 - 2016

Herbarium GB, University of Gothenburg

Marine Water Column Samples Targeted loci environmental

INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA

University of Michigan Herbarium

New Zealand Fungal and Plant Disease Collection (PDD)

Eukaryotic diversity in Central Park

Protists community in the southern East China Sea

Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.

Svalbard Targeted Locus (Loci)

Raw sequence reads from soil relic DNA study

The Fungal Collection at the Botanische Staatssammlung München

Diet analysis of Japanese sardine and Pacific round herring larvae

MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer

marine metagenome Raw sequence reads

There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work

Marine metagenomes from the bioGEOTRACES project

sediment metagenome Metagenome

INSDC Environment Sample Sequences

Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Department of Plant Protection

Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses

Fungal Specimens of National Museum of Nature and Science (TNS)

Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Mycological Herbarium

Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing

Records of the DAFWA Plant Pathology Collection

Microbial eukaryote 454 Roche sequencing in estuarine ecosystems

iNaturalist Research-grade Observations

Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China

microbial community diversities of Tuosu Lake

magnetite Targeted Locus (Loci)

URM - Herbário Pe. Camille Torrand

PERTH AVH data

Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.

CARBOM cruise 2013 flow cytometry sorted phytoplankton

E. C. Smith Herbarium (ACAD)

University of British Columbia Herbarium (UBC) - Fungi Collection

INSDC Sequences

Leicestershire and Rutland Environmental Records Centre records 2010-2014

Temporal sampling of marine metagenomes from Station ALOHA and BATS

IPA - Herbário - IPA Dárdano de Andrade Lima

sediment metagenome Raw sequence reads

Microbial Processes and Biodiversity: OCEAN

White sea picoplankton Metagenome

Fungi (S)

EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods

Soil marker gene sequences across the Nutrient Network

Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing

Harvard University Herbaria: All Records

HO AVH data

The cryptogamy collection (PC) at the Herbarium of the Muséum national d'Histoire Naturelle (MNHN - Paris)

marine sediment metagenome Metagenome

Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden

FBIP: Diversities of microbiomes from South African arid and natural soils

Extracellular DNA marine sediment Targeted Locus (Loci)

Sediment of acid mine drainage Targeted loci environmental

Artportalen (Swedish Species Observation System)

Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.

SAR amplicon from community incubated with various nanophytoplankton in microcosm

Microbial populations of Lascauxs Apse in relation to collembola and black stains on cave walls.

PlutoF platform reference-based occurrences

Microbial communities in estuarine sediments

sediment metagenome Metagenome

Naturalis Biodiversity Center (NL) - Botany

台灣真菌地理分布系統資料庫之建制與應用(1/4)

Herbarium of University of Coimbra (COI )

uncultured eukaryote Raw sequence reads

sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads

CABI Bioscience Genetic Resource Collection

CSIC-Real Jardín Botánico-Colección de Hongos Histórica (MA-Funhist)

sediment metagenome Raw sequence reads

Rutgers University, Chrysler Herbarium - Mycology Collection

Sediment Microcosm Metagenome

HURB - Herbário do Recôncavo da Bahia

ARMS Jeddah sample Raw sequence reads

Microbial communities associated with Eurasian watermilfoil, water and sediment

uncultured prokaryote Targeted loci environmental

CBS Filamentous Fungi Database

Bermuda Atlantic Time-series Study metagenomes

Marine metagenomes Metagenome

Microeukaryotes in metagenomic survey of ancient Siberian permafrost

Queensland Museum provider for OZCAM

soil bacteria and fungi Targeted loci environmental

Red Sea Zooplankton Raw sequence reads

Red Sea microbial plankton Raw sequence reads

De novo whole metagenome sequencing studies

Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.

PACA-Fungi - Herbarium Anchieta - Fungi Rickiani

Eukaryote diversity assessment of sediments of the Western English Channel

marine metagenome Raw sequence reads

ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters

NRW Regional Data: all taxa (excluding sensitive species), West Wales

Nitrate-storing microorganisms in sediments of the Bornholm Basin

Research on Airborne Ice Nucleating Species

International Barcode of Life project (iBOL)

Argyll Biological Records Dataset

Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.

CABI Bioscience Fungus Collection

Marine sediment metagenome raw sequence reads

Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)

The Fungal Collection at the Senckenberg Museum für Naturkunde Görlitz

envinronment Metagenome

Sediment Metagenome Raw sequence reads

USS-2

California Current Cruise CCE-P1408 Process Cruise #6

Protist Diversity in the East China Sea

Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads

Nutrient addition mesocosm experiment Targeted Locus (Loci)

Field Museum of Natural History (Botany) Fungi Collection

Sea ice and seawater Raw sequence reads