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GBIF.org (20 September 2020) GBIF Occurrence Download https://doi.org/10.15468/dl.hytqd8
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Sphaerobacteraceae
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2Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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1Biological Impacts of Ocean Acidification
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3Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean
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1marine sediment metagenome Raw sequence reads
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3microbial communities in long-term e-waste contaminated river sediments
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1XRCWU sediment metagenome Metagenome
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8Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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1Tucurui_Metagenoma_MGRAST
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11Incubation of marine methane seep sediments with a bioorthogonal amino acid
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1PREsediment Targeted Locus (Loci)
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2Queensland Marine Sediment
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476Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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1Salt marshes sediment microhabitats Metagenome
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29Microbial diversity before and after tidal re-instatement
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6Compost microbe establishment and growth in agricultural soils
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42Camargue soil and sediment 16S community profiling
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12Microbial community in PAH-contaminated riverine sediments
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3ZRM sediment metagenome Metagenome
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516S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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10Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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2coastal sediment diversity study
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1marine sediment metagenome Raw sequence reads
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17Soil metagenome from healthy and unhealthy agricultural soil
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1Seawater Metagenome
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4Hot springs Metagenome
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22Coastal Sediment Bacterial Community Alterations in Association with Sudden Vegetation Dieback
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1DSMZ Bacteria
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4Cave sediment Metagenome
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4photoautotrophic_biofilm
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1Loihi Seamount Targeted loci environmental
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1Depth profile of ancient sediments
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50Bacterial 16S rRNA gene sequencing of Antarctic soil
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1Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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165It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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56Lake sediment sequencing
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1DOS-1
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117Temporal variation in pesticide biodegradation
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2Sediment river Genome sequencing and assembly
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1nirS-Encoding and nirK-Encoding Denitrifiers in the Sediment of Daya Bay Raw sequence reads
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6Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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1Macroalgal Morphology affects composition and settlement of microbial communities
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10Salt Marsh Sediments Raw sequence reads
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6Saltern microbial community diversity
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448Bacerial and archaeal diversity in Central Park
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1microbial diversity Raw sequence reads
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6ZRCWD sediment metagenome Metagenome
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29CEFS_16S_ITS
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2XRCWD sediment metagenome Metagenome
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18Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC
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5Rifle sediment bacterial community Targeted Locus (Loci)
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4sediment metagenome Metagenome
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3CPN Metagenome
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2Lonar sediment Raw sequence reads
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1Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
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8BACTERIAL COMMUNITIES IN THE ACID AND THERMOPHILIC CRATER-LAKE OF THE VOLCANO "EL CHICHON", MEXICO
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54Biogeography of coastal wetland bacterial communities experiencing sudden vegetation dieoff
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8magnetite Targeted Locus (Loci)
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16Variation in freshwater stream sediment community 16S rRNA profiles along an urbanization gradient
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1EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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1Freshwater sediment Raw sequence reads
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2Groundwater microbiome
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10Sediment of acid mine drainage Targeted loci environmental
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36Reciprocal transplantation experiment of salt marsh sediments Targeted loci
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1MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments
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4Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments
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2Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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3Sewer sediments Targeted loci environmental
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70Marine Bacteria 16S V4 Raw sequence reads
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5sediment metagenome Metagenome
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8water sample Raw sequence reads
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1Metagenomics of Jacarepagua Lagoon
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23Soil16S
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5Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads
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3Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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2Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania
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2716S amplicons New Zealand agricultural soils
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66sediment metagenome Raw sequence reads
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6XRM sediment metagenome Metagenome
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7Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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5A practical introduction to microbial molecular ecology through the use of iChips
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1Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
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4seawater metagenome Genome sequencing and assembly
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9Microbial communities associated with Eurasian watermilfoil, water and sediment
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25PAH-contaminated sediment from the Lagos Lagoon, Nigeria
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1Future climate change affects the microbiome and condition of habitat-forming kelp
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3Marine bacteria metagenome
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5MeHg Coal Ash
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186Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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2Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
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28Chandeleur Island 2016 Amplicon Study Raw sequence reads
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83Time course change of microbial community in tsunami sediment caused by the Great East Japan Earthquake
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1PCE/TCE dechlorinating microbial community and dehalogenase genes from Wonju Stream, South Korea
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1The effect of salinity in prokaryotic communities in an estuary
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1Comparison of copper contaminated soils, with similar uncontaminated controls.
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2Assessing the microbial diversity in Cape Comorin ocean water
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1Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
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1Marine methane seep Targeted Locus (Loci)
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7Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes
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1Surface sediment of Yellow Sea, Bohai Sea and north East China Sea Metagenome
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1Microbial community structure or iron oxyhydroxides rich mound in Satsuma Iwo-jima, Japan
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191Response of soil bacteria to anthropogenic soil variables at large spatial scales
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1Old Rifle sediment Raw sequence reads
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476Organic agricultural field soil Raw sequence reads
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2Raw sequence reads
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30estuary metagenome Raw sequence reads
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64Geographically tagged INSDC sequences
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1Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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3Eastern offshore environmental monitoring of Krishna Godavari Basin Bay of Bengal 2013-2016, Funded by: ONGC India
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516S rDNA sequencing
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1Microbial communities in marine surface water
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9Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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6PCB-contaminated sediment Genome sequencing
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216S rRNA genes Random survey
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1Guaymas Basin and Sonora Margin sediment Targeted loci
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2particle-attached and free-living bacteria kongsfjorden
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1Microbial mats and sediments from Atacama
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36Microbial biogeography of French caves
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4Saltern of Margherita di Savoia Metagenome
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3DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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19Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation
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4Nahant Collection
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40US East Coast Salt Marshes Targeted Locus (Loci)
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2Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea
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14permafrost metagenome Targeted loci environmental
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3Eastern Mediterranean Sea Lignin and Xylan enrichments
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1Lakes ediments of the Amazon River system Raw sequence reads
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2Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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5XRU sediment metagenome Metagenome
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1Long distance electron transfer by cable bacteria in aquifer sediments
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5uncultured prokaryote Targeted loci environmental
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2BES pyrosequencing
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13Antimony contaminated sediments Raw sequence reads
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1Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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4ZRU sediment metagenome Metagenome
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3estuary metagenome Raw sequence reads
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8MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer
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3Sundarbans estuarine ecosystem Metagenome
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13Marine metagenomes from the bioGEOTRACES project
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8Bacterial community structure and their predicted functions in coastal sediments
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1Microbial communities in the ocean Raw sequence reads
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4Qinghai Lake sediments Metagenome
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1Microbiome profiling Schlöppnerbrunnen peat cores from different depths
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2Microbial diversity in benthic stream sediment
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1DSMZ Prokarya Collection Catalogue
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1Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis
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1dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment
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1microbial community diversities of Tuosu Lake
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34marine metagenome Metagenome
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2Coral
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24Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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198Soil Microbial communities from weed germination bioassay targeted loci environmental
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1Coastal seawater influenced by the municipal effluents Raw sequence reads
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10Temporal sampling of marine metagenomes from Station ALOHA and BATS
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2Baltic Sea
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77Soil marker gene sequences across the Nutrient Network
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3Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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38soil metagenome Raw sequence reads
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71the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads
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16marine sediment metagenome Metagenome
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1Biological rejuvenation of iron oxides in bioturbated marine sediments
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3sediment metagenome Raw sequence reads
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4Pond sediments Metagenome
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1marine sediment Raw sequence reads
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1Arctic Ocean
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3Genetic potential for pentachlorophenol degradation at historically contaminated groundwater sites
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21Effects of different types of wastewater on microbial degradation of 2,2'',4,4''-tetrabromodiphenyl ether (BDE-47) in anaerobic sediment.
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1MICROBIS database
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1Bacterial communities from Thrombolites of Lake Sarmiento
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32Microbial community in on-site tsunami sediment caused by the Great East Japan Earthquake
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3Sediment surface microbial community changes due to phytoplankton addition
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203Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments
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8Diversities of bacteria and archaea in Sanya mangrove sediments
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7Soil bacterial communities (Hainich National Park)
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83Soil bacterial diversity is associated with human population density in urban greenspaces
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2Porcupine Seabight 16S Ribosomal RNA
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3Indian_sediments
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59Soil microbial response to organic disturbances
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1Soil microbial distribution
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10ZRD sediment metagenome Metagenome
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6Bacterial community of river sediment enriched with polycyclic aromatic hydrocarbons
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3Enrichment of organohalide respiring bacteria
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57Marine metagenomes Metagenome
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1Nuunat- ORMS formation during oil biodegradation at low temperature
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3soil bacteria and fungi Targeted loci environmental
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10Microbial ecology of bacteiral community in sediment from adjacent waters of Rushan Bay
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12microbial community composition of marine water and sediment
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1Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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1Bacterial Biogeography of Coastal Water in the Northern East China Sea
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3Marine sediment Raw sequence reads
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1Heterogeneity of methane seep microbiomes in the NE Pacific
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2marine sediment metagenome Targeted loci environmental
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20SCHEMA_Sediment
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5Marine sediment metagenome
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37Sediment Metagenome Raw sequence reads
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1Aarhus Bay Station M5 sediment metagenome sequencing
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1Bacterial 16S rRNA and fungal ITS Metagenome
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4marine sediment metagenome Targeted loci environmental