Soil bacterial communities (Hainich National Park)

doi:10.15468/wem7un

Soil bacterial communities (Hainich National Park)

Citation

MGnify (2020). Soil bacterial communities (Hainich National Park). Sampling event dataset https://doi.org/10.15468/wem7un accessed via GBIF.org on 2021-06-21.

Description

This study focuses on the influence of tree species composition, soil properties and seasonality on the structure of soil bacterial communities by employing high-throughput sequencing of the 16SrRNA gene. Soil cores were collected from bulk soil (0 - 5 cm depth) within eight tree clusters containing mono-species (beech, horn, lime and oak) and mixed-species (BOH, BOL, BHL and OHL) stands during Spring, Summer and Autumn 2012.

Sampling Description

Sampling

This study focuses on the influence of tree species composition, soil properties and seasonality on the structure of soil bacterial communities by employing high-throughput sequencing of the 16SrRNA gene. Soil cores were collected from bulk soil (0 - 5 cm depth) within eight tree clusters containing mono-species (beech, horn, lime and oak) and mixed-species (BOH, BOL, BHL and OHL) stands during Spring, Summer and Autumn 2012.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Dukunde A, Schneider D, Schmidt M, Veldkamp E, Daniel R. 2019. Tree Species Shape Soil Bacterial Community Structure and Function in Temperate Deciduous Forests. Front Microbiol vol. 10 - DOI:10.3389/fmicb.2019.01519

Contacts

originator
Institute of Microbiology and Genetics

metadata author
Institute of Microbiology and Genetics

administrative point of contact
Institute of Microbiology and Genetics