dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment

doi:10.15468/gqjtjm

dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment

Citation

MGnify (2018). dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment. Sampling event dataset https://doi.org/10.15468/gqjtjm accessed via GBIF.org on 2020-01-28.

Description

Seabed communities of sulfate-reducing microorganisms were profiled by Illumina MiSeq sequencing of the dsrB gene from four different sites up to a depth of 5.3 meters below seafloor.

Sampling Description

Sampling

Seabed communities of sulfate-reducing microorganisms were profiled by Illumina MiSeq sequencing of the dsrB gene from four different sites up to a depth of 5.3 meters below seafloor.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Marshall IPG, Ren G, Jaussi M, Lomstein BA, Jørgensen BB, Røy H, Kjeldsen KU. 2019. Environmental filtering determines family-level structure of sulfate-reducing microbial communities in subsurface marine sediments. ISME J vol. 13 - DOI:10.1038/s41396-019-0387-y

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