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Soil microbial response to organic disturbances

Dataset homepage

Citation

MGnify (2018). Soil microbial response to organic disturbances. Sampling event dataset https://doi.org/10.15468/j6mu48 accessed via GBIF.org on 2023-01-28.

Description

We employed a deep 16S amplicon sequencing approach to evaluate the recovery of the native soil microbiome after multiple disturbances caused by the application of organic vinasse residue, inorganic nitrogen (N) or a combination of both during the sugarcane crop-growing season.

Sampling Description

Sampling

We employed a deep 16S amplicon sequencing approach to evaluate the recovery of the native soil microbiome after multiple disturbances caused by the application of organic vinasse residue, inorganic nitrogen (N) or a combination of both during the sugarcane crop-growing season.

Method steps

  1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

  1. Lourenço KS, Suleiman AKA, Pijl A, van Veen JA, Cantarella H, Kuramae EE. 2018. Resilience of the resident soil microbiome to organic and inorganic amendment disturbances and to temporary bacterial invasion. Microbiome vol. 6 - DOI:10.1186/s40168-018-0525-1

Contacts

originator
NIOO-KNAW
metadata author
NIOO-KNAW
administrative point of contact
NIOO-KNAW
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