CPN Metagenome

doi:10.15468/l8blal

CPN Metagenome

Citation

MGnify (2019). CPN Metagenome. Sampling event dataset https://doi.org/10.15468/l8blal accessed via GBIF.org on 2023-10-03.

Description

Paired end illumine sequencing of V4 region of the 16S rRNA gene along with biolog ecoplate has been performed to systematically evaluate the bacterial community and their metabolic activity of cave sediments in Meghalaya, India

Sampling Description

Sampling

Paired end illumine sequencing of V4 region of the 16S rRNA gene along with biolog ecoplate has been performed to systematically evaluate the bacterial community and their metabolic activity of cave sediments in Meghalaya, India

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

De Leon MP, Montecillo AD, Pinili DS, Siringan MAT, Park DS. 2018. Bacterial diversity of bat guano from Cabalyorisa Cave, Mabini, Pangasinan, Philippines: A first report on the metagenome of Philippine bat guano. PLoS One vol. 13 - DOI:10.1371/journal.pone.0200095
De Mandal S, Zothansanga, Panda AK, Bisht SS, Senthil Kumar N. 2015. First report of bacterial community from a Bat Guano using Illumina next-generation sequencing. Genom Data vol. 4 - DOI:10.1016/j.gdata.2015.04.001

Contacts

originator
Mizoram University

metadata author
Mizoram University

administrative point of contact
Mizoram University