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Checklist of rust fungi (Pucciniales) occurring in Portugal

Citation

Talhinhas P, Carvalho R, Figueira R, Ramos A P (2021). Checklist of rust fungi (Pucciniales) occurring in Portugal. Version 1.4. Instituto Superior de Agronomia / Universidade de Lisboa. Checklist dataset https://doi.org/10.15468/2j2nkd accessed via GBIF.org on 2024-12-15.

Description

The order Pucciniales encompasses over 5000 recognised species, grouped in 120 genera. Commonly known as rust fungi, they are strict biotrophic pathogens of vascular plants, often responsible for important economic losses in agriculture and forestry. Other species are often uncommon and could be endangered. Portugal, including the Macaronesian archipelagos of Azores and Madeira, is geographically placed in a confluence point between Europe, Africa and America, and it may be a natural or human-driven entry-point of exotic biological entities into mainland Europe. In this work we have retrieved and analysed data for 2313 occurrences of rust fungi from 253 species based on 115 publications and our own surveys. This list was updated according to current taxonomic framework and georeferenced using the GBIF platform. The present checklist includes host names, seasonality, life cycle stage, geographical distribution and comments. A list of rust fungus sorted according to their host plants was also prepared. Altogether, this will provide a tool for diagnosis of rust fungi occurring in Portugal (and elsewhere in Europe), enabling to understand their spatiotemporal dynamics and to point out recent introduction of exotic species, along with situations of potential conservationistic value.

Sampling Description

Method steps

  1. Georeferencing was performed following Chapman and Wieczorek (2006), using Google Maps to retrieve coordinates based on searches of record localities, complemented, when needed, by the use of the Portuguese gazetteer and online GIS tools provided by Centro de Informação Geoespacial do Exército, Portugal (http://www.igeoe.pt/igeoesig/).
  2. Scientific names, both of the fungi and the host plants, were check for potential synonyms in Index Fungorum/Species Fungorum (http://www.speciesfungorum.org/Names/Names.asp) and The Plant List (http://www.theplantlist.org/) web sites respectively. Ecological information on the host plants in Portugal was retrieved using the Flora–On web site http://www.flora-on.pt.

Taxonomic Coverages

Rust fungi (Basidiomycota, Pucciniales)
  1. Fungi
    rank: kingdom
  2. Basidiomycota
    rank: phylum
  3. Pucciniomycetes
    rank: class
  4. Pucciniales
    rank: order

Geographic Coverages

Geographic distribution in mainland Portugal by “Distrito” and in Azores and Madeira by island.

Bibliographic Citations

  1. Gonçalves da Cunha, A. (1936). Uredíneas de Portugal. Boletim da Sociedade Broteriana 21: 169-266. -
  2. Câmara, E.S. (1931). Mycetes aliquot novi aliique in Mycoflora Lusitaniae ignoti III. Anais do Instituto Superior de Agronomia 4:200-208 -
  3. Gjaerum, H.B. (1982). Rust fungi from Madeira. Boletim do Museu Municipal do Funchal 34: 5-22. -
  4. Gjaerum, H.B. & Dennis, R.W.G. (1976). Additions to the rust flora (Uredinales) of the Azores. Vieraea 6(1): 103-120. -
  5. Tavares, S.; Ramos, A.P.; Pires, A.S.; Azinheira, H.G.; Caldeirinha, P.; Link, T.; Abranches, R.; Silva, M.C.; Voegele, R.T.; Loureiro, J. & Talhinhas, P. (2014). Genome size analyses of Pucciniales reveal the largest fungal genomes. Frontiers in Plant Science 5:422. -
  6. Ramos, A.P.; Tavares, S.; Tavares, D.; Silva, M.C.; Loureiro, J. Talhinhas, P. (2015). Flow cytometry reveals that the rust fungus Uromyces bidentis (Pucciniales) possesses the largest fungal genome reported, 2,489 Mbp. Molecular Plant Pathology 16(9): 1006-1010. -
  7. Talhinhas, P.; Ramos, A.P.; Tavares, D.; Tavares, S. & Loureiro, J. (2015). Genome size estimates for six rust (Pucciniales) species. Revista de Ciências Agrárias 38(2): 178-185. -
  8. Talhinhas, P.; Silva, E.; Nunes, N. & Ramos, A.P. (2016). First report of Puccinia thaliae causing rust on canna in Europe. Plant Disease 100(6):1242. -
  9. Silva, E.; Carvalho, R.; Nunes, N.; Ramos, A.P. & Talhinhas, P. (2016). First report of Puccinia hemerocallidis causing daylily rust in Europe. Plant Disease 100(10):2163. -
  10. Gjaerum, H.B. (1990). Additions to the Knowledge of the rust flora of Portugal. Lidia 3:28-30 -
  11. Câmara, E.S.; Oliveira, A.L.B. & Luz, C.G. (1939). Uredales aliquot Lusitaniae I. Agronomia Lusitana 1(4):410-434 -
  12. Câmara, E.S.; Oliveira, A.L.B. & Luz, C.G. (1940). Uredales aliquot Lusitaniae I (cont.). Agronomia Lusitana 2(2):113-167 -
  13. Câmara, E.S.; Oliveira, A.L.B. & Luz, C.G. (1943). Uredales aliquot Lusitaniae III. Agronomia Lusitana 5(4):317-347 -
  14. Câmara, E.S.; Oliveira, A.L.B. & Luz, C.G. (1940). Uredales aliquot Lusitaniae II. Agronomia Lusitana 2(4):337-377 -
  15. Câmara, M.S. (1919). Mycetes aliquot novi alique in mycoflora Lusitaniae ignoti. Revista Agronómica 14:49-59 -
  16. Câmara, E.S. (1951). Mycetes aliquot Lusitaniae XII. Agronomia Lusitana 13(3):185-212 -
  17. Câmara, E.S. (1949). Mycetes aliquot Lusitaniae X. Agronomia Lusitana 11(3):165-189 -
  18. Câmara, E.S. (1949). Mycetes aliquot Lusitaniae X. Agronomia Lusitana 11(1):39-73 -
  19. Câmara, E.S. (1948). Mycetes aliquot Lusitaniae VIII. Agronomia Lusitana 10(4):279-320 -
  20. Câmara, E.S. & Luz, C.G. (1939). Mycetes aliquot Lusitaniae III. Agronomia Lusitana 1(2):167-199 -
  21. Costa, M.E.A.P. & Câmara, E.S. (1952). Species aliquae mycologicae Lusitaniae II. Portugaliae Acta Biologica (B) 3(3):294-307 -
  22. Costa, M.E.A.P. & Câmara, E.S. (1954). Species aliquae mycologicae Lusitaniae III. Portugaliae Acta Biologica (B) 4(3):331-345 -
  23. Costa, M.E.A.P. & Câmara, E.S. (1955). Species aliquae mycologicae Lusitaniae IV. Portugaliae Acta Biologica (B) 17:153-165 -
  24. Costa, M.E.A.P. (1959). Species aliquae mycologicae Lusitaniae V. Portugaliae Acta Biologica (B) 6(3):219-231 -
  25. Costa, M.E.A.P. (1962). Species aliquae mycologicae Lusitaniae VI. Portugaliae Acta Biologica (B) 7(4):277-287 -
  26. Dias, M.R.S. & Câmara, E.S. (1952). Fungi Lusitaniae I. Agrononomia Lusitana 14(2): 101-125 -
  27. Lucas, M.T. & Câmara, E.S. (1952). Fungi Lusitaniae II. Agronomia Lusitana 14(3): 193-227 -
  28. Câmara, E.S. & Vasconcelos, A.T. (1952). Fungi Lusitaniae III. Agronomia Lusitana 14(4): 249-257 -
  29. Dias, M.T. & Câmara, E.S.(1953). Fungi Lusitaniae IV. Agronomia Lusitana 15(1): 17-36 -
  30. Lucas, M.T. & Câmara, E.S. (1952). Fungi Lusitaniae II. Agronomia Lusitana 15(2): 154-180 -
  31. Câmara, E.S. & Vasconcelos, A.T. (1953). Fungi Lusitaniae VI. Agronomia Lusitana 15(3): 183-190 -
  32. Dias, M.R.S. & Câmara, E.S. (1954). Fungi Lusitaniae VII. Agronomia Lusitana 16(1): 5-15 -
  33. Lucas, M.T. & Câmara, E.S. (1954). Fungi Lusitaniae VIII. Agronomia Lusitana 16(2): 81-104 -
  34. Santos, A.C. & Câmara, E.S. (1954). Fungi Lusitaniae IX. Agronomia Lusitana 16(3): 175-190 -
  35. Câmara, E.S. & Vasconcelos, A.T. (1955). Fungi Lusitaniae X. Agronomia Lusitana 17(2): 91-100 -
  36. Santos, A.C. & Câmara, E.S. (1955). Fungi Lusitaniae XIII. Agronomia Lusitana 17: 135-152 -
  37. Lucas, M.T. & Câmara, E.S. (1955). Fungi Lusitaniae XII. Agronomia Lusitana 17: 115-131 -
  38. Dias, M.R.S. & Câmara, E.S. (1955). Fungi Lusitaniae XI. Agronomia Lusitana 17(2): 101-113 -
  39. Lucas, M.T. (1956). Fungi Lusitaniae XIV. Agronomia Lusitana 18(2): 109-122 -
  40. Dias, M.R.S. (1956). Fungi Lusitaniae XV. Agronomia Lusitana 18(4): 237-242 -
  41. Lucas, M.T. (1957). Fungi Lusitaniae XVI. Agronomia Lusitana 19(1): 23-29 -
  42. Dias, M.R.S. & Teixeira, R.S.S. (1962). Fungi Lusitaniae XVIII. Agronomia Lusitana 24(1): 33-38 -
  43. Dias, M.R.S. & Lucas, M.R.S. (1962). Fungi Lusitaniae XIX. Agronomia Lusitana 24(1): 39-43 -
  44. Dias, M.R.S. & Lucas, M.R.S. (1965). Fungi Lusitaniae XX. Agronomia Lusitana 26(1): 5-19 -
  45. Dias, M.R.S. & Lucas, M.R.S. (1965). Fungi Lusitaniae XXI. Agronomia Lusitana 27(2): 87-95 -
  46. Dias, M.R.S. & Lucas, M.R.S. (1966). Fungi Lusitaniae XXII. Agronomia Lusitana 28(3-4): 125-131 -
  47. Dias, M.R.S. & Lucas, M.R.S. (1972). Fungi Lusitaniae XXIII. Agronomia Lusitana 33: 173-184 -
  48. Dias, M.R.S. & Lucas, M.R.S. (1974). Fungi Lusitaniae XXIV. Agronomia Lusitana 35(2): 137-144 -
  49. Dias, M.R.S. & Lucas, M.R.S. (1975). Fungi Lusitaniae XXV. Agronomia Lusitana 37(1): 95-103 -
  50. Dias, M.R.S. & Lucas, M.R.S. (1978). Fungi Lusitaniae XXV. Agronomia Lusitana 38(4): 285-295 -
  51. Dias, M.R.S. & Lucas, M.R.S. (1980). Fungi Lusitaniae XXVII. Agronomia Lusitana 40(2): 135-144 -
  52. Dias, M.R.S., Lucas, M.R.S. & Lopes, M.C. (1981). Fungi Lusitaniae XXVIII. Agronomia Lusitana 41(2): 77-92 -
  53. Dias, M.R.S., Lucas, M.R.S. & Lopes, M.C. (1982). Fungi Lusitaniae XXIX. Agronomia Lusitana 41(3-4): 175-192 -
  54. Dias, M.R.S., Lucas, M.R.S. & Lopes, M.C. (1987). Fungi Lusitaniae XXX. Agronomia Lusitana 42(3-4): 179-188 -
  55. Câmara, E.S. (1932). Contribuitiones ad Mycofloram Lusitaniae X. Revista Agronómica 20(1):5-63 -
  56. Câmara, E.S. & Luz, C. (1939). Mycetes aliquot Lusitaniae II. Agronomia Lusitana 1(1):41-63 -

Contacts

Pedro Talhinhas
originator
position: Researcher
Instituto Superior de Agronomia, Universidade de Lisboa
Tapada da Ajuda
Lisbon
PT
email: ptalhinhas@isa.ulisboa.pt
userId: http://orcid.org/0000-0001-6694-7502
Rita Carvalho
originator
position: Researcher
Instituto Superior de Agronomia, Universidade de Lisboa
Tapada da Ajuda
Lisbon
PT
Rui Figueira
originator
position: Researcher
Instituto Superior de Agronomia, Universidade de Lisboa
Tapada da Ajuda
Lisbon
PT
Ana Paula Ramos
originator
position: Researcher
Instituto Superior de Agronomia, Universidade de Lisboa
Tapada da Ajuda
Lisbon
PT
Pedro Talhinhas
metadata author
position: Researcher
Instituto Superior de Agronomia, Universidade de Lisboa
Tapada da Ajuda
Lisbon
PT
email: ptalhinhas@isa.ulisboa.pt
userId: http://orcid.org/0000-0001-6694-7502
Rui Figueira
user
email: ruifigueira@isa.ulisboa.pt
Pedro Talhinhas
administrative point of contact
position: Researcher
Instituto Superior de Agronomia, Universidade de Lisboa
Tapada da Ajuda
Lisbon
PT
email: ptalhinhas@isa.ulisboa.pt
userId: http://orcid.org/0000-0001-6694-7502
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