Bacterial 23S Ribosomal RNA RefSeq Targeted Loci Project

doi:10.15468/5cedfd

Bacterial 23S Ribosomal RNA RefSeq Targeted Loci Project

Citation

National Center for Biotechnology Information (NCBI) (2013). Bacterial 23S Ribosomal RNA RefSeq Targeted Loci Project. Occurrence dataset https://doi.org/10.15468/5cedfd accessed via GBIF.org on 2024-12-15.

Description

The 23S ribosomal RNA targeted loci project is the result of an international collaboration between a number of ribosomal RNA databases and NCBI to provide a curated and comprehensive set of complete and near full length Reference Sequence records for phylogenetic and evolutionary analyses. Sequences that represent the consensus of all contributing databases in both sequence content and taxonomic assignment are promoted to RefSeqs. All sequences will have the same project ID and can be found as such. Database URL: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA188943.

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

O'Leary, N.A., Wright, M.W., Brister, J.R., Ciufo, S., Haddad, D., McVeigh, R., Rajput, B., Robbertse, B., Smith-White, B., Ako-Adjei, D., Astashyn, A., Badretdin, A., Bào, Y., Blinkova, O., Brover, V., Chetvernin, V., Choi, J., Cox, E., Ermolaeva, O.D., Farrell, C.M., Goldfarb, T., Gupta, T., Haft, D.H., Hatcher, E., Hlavina, W., Joardar, V.S., Kodali, V.K., Li, W.J., Maglott, D.R., Masterson, P., McGarvey, K.M., Murphy, M.R., O'Neill, K., Pujar, S., Rangwala, S.H., Rausch, D., Riddick, L.D., Schoch, C.L., Shkeda, A., Storz, S.S., Sun, H., Thibaud-Nissen, F., Tolstoy, I., Tully, R.E., Vatsan, A.R., Wallin, C., Webb, D., Wu, W.X., Landrum, M.J., Kimchi, A., Tatusova, T.A., DiCuccio, M., Kitts, P.A., Murphy, T.D., Pruitt, K.D. (2016). Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Research, 44, D733 - D745. - DOI:10.1093/nar/gkv1189
Conrad L Schoch, Stacy Ciufo, Mikhail Domrachev, Carol L Hotton, Sivakumar Kannan, Rogneda Khovanskaya, Detlef Leipe, Richard Mcveigh, Kathleen O’Neill, Barbara Robbertse, Shobha Sharma, Vladimir Soussov, John P Sullivan, Lu Sun, Seán Turner, Ilene Karsch-Mizrachi, NCBI Taxonomy: a comprehensive update on curation, resources and tools, Database, Volume 2020, 2020, baaa062 - DOI:10.1093/database/bax072

Contacts

originator
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homepage: https://www.ncbi.nlm.nih.gov/