Oomycetes Internal Transcribed Spacer RNA (ITS) RefSeq Targeted Loci Project

Citation

Description

Similar to the Fungi ITS RefSeq Targeted Loci project (PRJNA177353) we aim to provide a curated set of complete and near full length sequences with specimen data and correct taxonomic names with the help from experts in the Ooomycetes research community. Database URL: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA362621.

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

1. O'Leary, N.A., Wright, M.W., Brister, J.R., Ciufo, S., Haddad, D., McVeigh, R., Rajput, B., Robbertse, B., Smith-White, B., Ako-Adjei, D., Astashyn, A., Badretdin, A., Bào, Y., Blinkova, O., Brover, V., Chetvernin, V., Choi, J., Cox, E., Ermolaeva, O.D., Farrell, C.M., Goldfarb, T., Gupta, T., Haft, D.H., Hatcher, E., Hlavina, W., Joardar, V.S., Kodali, V.K., Li, W.J., Maglott, D.R., Masterson, P., McGarvey, K.M., Murphy, M.R., O'Neill, K., Pujar, S., Rangwala, S.H., Rausch, D., Riddick, L.D., Schoch, C.L., Shkeda, A., Storz, S.S., Sun, H., Thibaud-Nissen, F., Tolstoy, I., Tully, R.E., Vatsan, A.R., Wallin, C., Webb, D., Wu, W.X., Landrum, M.J., Kimchi, A., Tatusova, T.A., DiCuccio, M., Kitts, P.A., Murphy, T.D., Pruitt, K.D. (2016). Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Research, 44, D733 - D745. - DOI:10.1093/nar/gkv1189
2. Conrad L Schoch, Stacy Ciufo, Mikhail Domrachev, Carol L Hotton, Sivakumar Kannan, Rogneda Khovanskaya, Detlef Leipe, Richard Mcveigh, Kathleen O’Neill, Barbara Robbertse, Shobha Sharma, Vladimir Soussov, John P Sullivan, Lu Sun, Seán Turner, Ilene Karsch-Mizrachi, NCBI Taxonomy: a comprehensive update on curation, resources and tools, Database, Volume 2020, 2020, baaa062 - DOI:10.1093/database/bax072