Appliaction of metagenomic technique for isolation of microbes from mangroves for potential use in biofertilization and bioremediation
Citation
MGnify (2019). Appliaction of metagenomic technique for isolation of microbes from mangroves for potential use in biofertilization and bioremediation. Sampling event dataset https://doi.org/10.15468/jqtrkg accessed via GBIF.org on 2024-09-01.Description
The sequences submitted are the fingal ITS metagenomic. The mangrove ecosystem of Goa forms a very important bio-repository. Therefore, the ITS metagenomic DNA sequences obtained from Goa coastline will help to develop a gross idea about the fungal community members present in the mangrove sediments of North and South Goa. This is the first report of fungal metagenomic sequences for Mandovi & Zuari mangrove ecosystem obtained through illumina Miseq platform.Sampling Description
Sampling
The sequences submitted are the fingal ITS metagenomic. The mangrove ecosystem of Goa forms a very important bio-repository. Therefore, the ITS metagenomic DNA sequences obtained from Goa coastline will help to develop a gross idea about the fungal community members present in the mangrove sediments of North and South Goa. This is the first report of fungal metagenomic sequences for Mandovi & Zuari mangrove ecosystem obtained through illumina Miseq platform.Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
- Haldar S, Nazareth SW. 2019. Diversity of fungi from mangrove sediments of Goa, India, obtained by metagenomic analysis using Illumina sequencing. 3 Biotech vol. 9 - DOI:10.1007/s13205-019-1698-4
Contacts
originatorGoa University
metadata author
Goa University
administrative point of contact
Goa University