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Echinoderms occurence in a strongly contaminated Bay (Portman, Spain), using ROV and Scuba-diving surveys

Dataset homepage

Citation

Danis B, Coupremanne M (2019). Echinoderms occurence in a strongly contaminated Bay (Portman, Spain), using ROV and Scuba-diving surveys. Version 1.5. Université Libre de Bruxelles (ULB). Sampling event dataset https://doi.org/10.15468/wew7hf accessed via GBIF.org on 2025-05-25.

Description

Context : The bay of Portman and the adjacent shoreline are exposed to one of the most severe cases of sediments contamination by heavy metals of the whole Mediterranean Sea, due to decades of industrial mining activities which took place in the locality from 1951 to 1991.

This dataset countains fine scale distribution data for echinoderms collected around the bay of Portman (Murcia, Spain) by the Marine biology laboratory (ULB) in October 2013.

The fine scale cartography was realized for both the contamination gradient pattern and the benthic species distribution within the study area. Environmental data are gathered into the Measurement or Facts extension. Most of these data concern heavy metal concentrations (Fe,Cu,Cd,Pb,Zn), for both the total and the finest (particle size <63µm) granulometric fractions of the sediments. Benthic species distribution data are compiled in a DarwinCore archive. The major part of the data are derived from imagery-based identifications on video transects operated with a micro-ROV (VideoRay PRO3 GTO). But it also countains observations made by scuba divers, ad hoc observations, and sampled specimens for the purpose of physiological/ecotoxicological studies.

Purpose

This pool of samples and video transects constitutes a unique benchmark to address potential future changes, for example in the mining activities of the Bay of Portman.

Sampling Description

Study Extent

The sampling campain was conducted from the 17 to the 24 october 2013, and each sampling event was performed between 10 am and 5pm. Only shallow water ecosystems were sampled (<25m depth). Two sets of sampling stations were determined in order to describe the contamination gradient patterns (1) within the bay of Portman and (2) along a section of the adjacent North-East shoreline. 1: 7 Stations were determined within the bay. The initial principle was to operate two parallel transects starting from the shoreline (the presumed source of contamination)and heading seaward. 2. 6 others samling stations were placed alongside the shoreline for about 1.4 km long. Only The North-Eastern coast side, following the main current, has been sampled. For the data publication process, new events have been generated to store the ad Hoc observations made during the sampling campain.

Sampling

Each sampling station was reached by pneumatic boat (Zodiac MK2 Virage). The first step was to record station relative data ; - WGS84 Coordinates (using a hand GPS Garmin Dakota© 20) - Sea Surface Temperature. In a second time, the following samples were collected by divers ; - 50mL Falcons were filled with sediments, waiting the return to the laboratory for the separation of the finest granulometric fraction (<63µm size) and the H.M content analysis. The metal content analysis methods and results (average of 3 replicates) are detailled in the Measurement Or Facts extension for both the total and the finest fractions. - Water samples for pH and salinity determination. - Specimens : Echinoderms were preserved into ethanol (80%) and stored into the marine biology labs under the collection name 'ULB P'. Each specimen that could belong to a potentially distinct species was collected. The collection was used as a material basis for the identification and as a reference for the imagery based recognition. In another hand, sea urchins (Paracentrotus lividus, Arbacia lixula) and some algae samples were preserved for comparative studies on acid-base physiology and microbial community structures. The last step was the realisation of high resolution video transects, using a micro-ROV (VideoRay pro 3 XE GTO) equipped with an additional HD camera (GOPRO 3 HERO). Straight transects (N,S,E and O) were performed from the georeferenced point to the maximum ROV range (75 meters), respecting a maximum effort of 30 minutes per station.

Quality Control

Some images extracted from the videos recordings and used as a basis for the observation records have been shared on the following web page : http://biomar.ulb.ac.be/portman-rov-sampling-gallery/ The shared pictures only concern uncertain or incomplete identifications and are open to comments (corrections and new observations).

Method steps

  1. Each video sample has been carefully viewed. Sure identifications were directly recorded in a spreadsheet, and all uncertain observations were previously extracted to the jpeg format using Avidemux software (V2.6.8). Finally, all data were stored into a spatialised database (MySQL), for their verification and their re-organisation under a Darwin Core schema.

Taxonomic Coverages

All marine organisms that could be indentified were recorded. Thus the dataset countains different marine phyla. Nevertheless, the sampling methods and identification efforts prioritized echinoderms (Echinodermata) and the majority of the occurrences belongs to this phylum.
  1. Animalia
    common name: Animals rank: kingdom
  2. Plantae
    common name: plants rank: kingdom
  3. Echinodermata
    common name: Echinoderms rank: phylum

Geographic Coverages

Portman Bay and adjacent North-Estern shoreline (Approximately 1.4 kilometer section). Only shallows (depth<25 meters) were sampled.

Bibliographic Citations

Contacts

Bruno Danis
originator
position: Professor
Université Libre de Bruxelles
Brussels
BE
email: bdanis@ulb.ac.be
Maxime Coupremanne
metadata author
position: Data Liaison officer
Belgian Biodiversity Platform
22 Avenue de la faculté
Gembloux
5030
Namur
BE
email: m.coupremanne@biodiversity.be
Danis Bruno
principal investigator
position: Professor
Université Libre de Bruxelles
Brussels
BE
email: bdanis@ulb.ac.be
homepage: http://biomar.ulb.ac.be
Maxime Coupremanne
administrative point of contact
position: Data liaison officer
Belgian Biodiversity Platform
22 Avenue de la faculté
Gembloux
5030
Namur
BE
email: m.coupremanne@biodiversity.be
Bruno Danis
administrative point of contact
position: Professor
Université libre de Bruxelles
Brussels
BE
email: bdanis@ulb.ac.be
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