Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chase (Orchidaceae) in the Komi Republic
Citation
Kirillov D, Kirillova I (2022). Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chase (Orchidaceae) in the Komi Republic. Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences. Occurrence dataset https://doi.org/10.15468/yc9hcv accessed via GBIF.org on 2024-12-14.Description
Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chase is an inconspicuous, greenish orchid that is widespread and has a circumboreal distribution. It also classified as belonging to a separate genus Coeloglossum as Coeloglossum viride (L.) Hartm. Evidence from analysis of single genes suggested that the genus Coeloglossum should be synonymized with Dactylorhiza, there is still discussion about the taxonomic status. Dactylorhiza viridis can be found throughout Europe, non-tropical Asia, Canada and the United States. It is preferably found in ancient chalk grassland, meadows, montane grasslands and light woods. In Komi Republic it occurs in swamps, forest and on limestone outcrops along river banks. In the mountains, D. viridis was revealed in the mountain meadow communities and mountain tundra. Flowering is in June-July, fruiting in July-August.
The data set contains data on the distribution of Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chase (Orchidaceae) in the Komi Republic, located in the European North-East Russia. In total, 287 localities of D. viridis have been found within the borders of the Komi Republic, including 240 herbarium specimens and 47 occurrence records. The herbarium specimens are stored in the Herbarium of the Institute of Biology of Komi Scientific Centre of the Ural Branch RAS (SYKO). The dataset includes 287 records.
Most of the occurrences’ descriptions included the following fields: "occurrenceID", "institutionCode", "basisOfRecord", "DatasetName", "eventDate", "year", "month", "day", "scientificName", "higherClassification", "kingdom", "phylum", "class", "order", "family", "genus", "specificEpithet", "scientificNameAuthorship", "taxonRank", "identifiedBy", "dateIdentified", "decimalLatitude", "decimalLongitude", "geodeticDatum", "coordinateUncertaintyInMeters", "verbatimCoordinateSystem", "georeferencedBy", "georeferencedDate", "continent", "country", "countryCode", "stateProvince", "county", "verbatimLocality", "language", "license", "collectionCode", "catalogNumber", "recordedBy", "otherCatalogNumbers", "associatedMedia".
The work was carried out with the financial support of the project «Herbarium funds of the biological diversity of plants and fungi of the Collection Fund of the Komarov Botanical Institute, Russian Academy of Sciences: modernization, development and networking as a basis for fundamental research and improvement of genetic technologies» (Agreement No. 075-15-2021-1056 dated 09/28/2021).
Sampling Description
Study Extent
The study was carried in whole territory of the Komi Republic. The occurrence data were collected from an area of approximately 416.8 thousand square km. The point set was prepared with data obtained as a result of field studies of the authors and data acquired from vascular plant collection of SYKO herbaria.Sampling
For each of the occurrence unit location, topography, geo-referenced was made.Quality Control
Data has been collected, and species identification was made or checked by botanists and florists from the Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences. The taxa names were normalized with help of the GBIF species matching tool (https://www.gbif.org/tools/species-lookup). The dataset was checked for errors and cleaned by methods described by R. Mesibov in A Data Cleaner's Cookbook [Mesibov 2021].Method steps
- The data of long-term field studies of the authors conducted in the Republic of Komi, including in specially protected natural areas, were summarized under the Kirobase – local database supported by authors. When carrying out field work, a route method was used to survey the sites typical for the growth of Dactylorhiza viridis. For all identified locations of the species, geographical coordinates were recorded using Garmin CSX 60 GPS receiver (WGS 84), the number of plants, the area of distribution were estimated, and a brief description of phytocenotic parameters were fixed. The herbarium label data were taken from vascular plants collection of the Institute of Biology of Komi Scientific Centre of the Ural Branch of the Russian Academy of Sciences Herbarium (SYKO). The every occurrence record where merged into the local database "Kirobase". The authors prepared occurrence data of every species occurrence record from the territory of the Komi Republic, not previously published in GBIF, with a common xlsx-template based on the occurrence template recommended by the GBIF (https://www.gbif.org/ru/news/82852/new-darwin-corespreadsheet-templates-simplify-data-preparation-and-publishing). Authors were allowed to add Darwin Core terms as additional fields in their xlsx-files. Georeferencing was performed according to the method described in the publication "Guide to best practices for georeferencing" (Chapman, Wieczorek, 2006). Georeference of occurrence record where made with the help of available topomaps to the territory of the Komi Republic. For rough reference used maps with a scale of 1: 200000. More accurate binding was carried out according to the satellite images presented on a publicly accessible Internet resources (https://wego.here.com; https://yandex.ru/maps, etc.). Part of the data obtained by the authors in the field. In this case, the values in the fields “decimalLongitude” and “decimalLatitute” were filled with original GPS coordinates and the “coordinateUncertaintyInMeters” field was set to a single value of 30 meters (means standard error of the GPS receiver). Each record in the occurrence dataset also included a URL leading to the corresponding occurences’ herbarium labels and species images. The species name were given according to “The World Flora Online” (former "The Plant List", accepted via http://www.worldfloraonline.org).
Taxonomic Coverages
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Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chasecommon name: Frog orchid rank: species
Geographic Coverages
Bibliographic Citations
Contacts
Dmitry Kirillovoriginator
position: corresponding author
Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Kommunisticheskaya St., 28
Syktyvkar
167000
Komi Republic
RU
email: kirdimka@mail.ru
homepage: https://ib.komisc.ru/rus/
userId: http://orcid.org/0000-0002-6577-693X
Irina Kirillova
originator
position: corresponding author
Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Kommunisticheskaya St., 28
Syktyvkar
167000
Komi Republic
RU
email: kirillova_orchid@mail.ru
homepage: https://ib.komisc.ru/rus/
userId: http://orcid.org/0000-0001-7774-7709
Dmitry Kirillov
metadata author
position: corresponding author
Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Kommunisticheskaya St., 28
Syktyvkar
167000
Komi Republic
RU
email: kirdimka@mail.ru
homepage: https://ib.komisc.ru/rus/
userId: http://orcid.org/0000-0002-6577-693X
Irina Kirillova
metadata author
position: corresponding author
Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Kommunisticheskaya St., 28
Syktyvkar
167000
Komi Republic
RU
email: kirillova_orchid@mail.ru
homepage: https://ib.komisc.ru/rus/
userId: http://orcid.org/0000-0001-7774-7709
Dmitry Kirillov
administrative point of contact
position: corresponding author
Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Kommunisticheskaya St., 28
Syktyvkar
167000
Komi Republic
RU
email: kirdimka@mail.ru
homepage: https://ib.komisc.ru/rus/
userId: http://orcid.org/0000-0002-6577-693X
Irina Kirillova
administrative point of contact
position: corresponding author
Institute of Biology of Federal Research Centre Komi Science Centre of the Ural Branch of the Russian Academy of Sciences
Kommunisticheskaya St., 28
Syktyvkar
167000
Komi Republic
RU
email: kirillova_orchid@mail.ru
homepage: https://ib.komisc.ru/rus/
userId: http://orcid.org/0000-0001-7774-7709