Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil
Citation
MGnify (2018). Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil. Sampling event dataset https://doi.org/10.15468/r7nhtt accessed via GBIF.org on 2021-01-16.Description
In this study bacterial community composition in Anopheles darlingi breeding waters was investigated. Four sites in Manaus Brazil were sampled by taking surface water. The water samples were DNA extracted and 16S rRNA genes were amplified and sequenced by MiSeq. The reads were then analysed and compared between the sites.Sampling Description
Sampling
In this study bacterial community composition in Anopheles darlingi breeding waters was investigated. Four sites in Manaus Brazil were sampled by taking surface water. The water samples were DNA extracted and 16S rRNA genes were amplified and sequenced by MiSeq. The reads were then analysed and compared between the sites.Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
- Nilsson LKJ, de Oliveira MR, Marinotti O, Rocha EM, Håkansson S, Tadei WP, de Souza AQL, Terenius O. 2019. Characterization of Bacterial Communities in Breeding Waters of Anopheles darlingi in Manaus in the Amazon Basin Malaria-Endemic Area. Microb Ecol vol. 78 - DOI:10.1007/s00248-019-01369-9
Contacts
originatorUppsala University, ICM, Microbiology
metadata author
Uppsala University, ICM, Microbiology
administrative point of contact
Uppsala University, ICM, Microbiology