Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for large DNA viruses.
Citation
MGnify (2020). Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for large DNA viruses.. Sampling event dataset https://doi.org/10.15468/p2sjj2 accessed via GBIF.org on 2025-07-15.Description
Seawater was filtered from different depths to retain small cell sizes (Girus Organisms). The DNA was extracted and amplified by PCR.Sampling Description
Sampling
Seawater was filtered from different depths to retain small cell sizes (Girus Organisms). The DNA was extracted and amplified by PCR.Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/5.0
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
- Cuadrat RRC, Sorokina M, Andrade BG, Goris T, Dávila AMR. 2020. Global ocean resistome revealed: Exploring antibiotic resistance gene abundance and distribution in TARA Oceans samples. Gigascience vol. 9 - DOI:10.1093/gigascience/giaa046
Contacts
originatorThe French National Sequencing Center (Genoscope)
Le Ponant Building D - 25 rue Leblanc
PARIS - RCS B 775 685 019
75015
FR
Telephone: +33 (0) 1 64 50 20 59
metadata author
The French National Sequencing Center (Genoscope)
Le Ponant Building D - 25 rue Leblanc
PARIS - RCS B 775 685 019
75015
FR
Telephone: +33 (0) 1 64 50 20 59
administrative point of contact
The French National Sequencing Center (Genoscope)
Le Ponant Building D - 25 rue Leblanc
PARIS - RCS B 775 685 019
75015
FR
Telephone: +33 (0) 1 64 50 20 59