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marine sediment metagenome Raw sequence reads

Dataset homepage

Citation

MGnify (2019). marine sediment metagenome Raw sequence reads. Sampling event dataset https://doi.org/10.15468/eix2ht accessed via GBIF.org on 2025-06-24.

Description

This dataset contains the bacterial and archaeal 16S rRNA sequence information from the Methane Microbial Observatory for Seafloor Analysis (MIMOSA) deployment at GC600 from October 2013 (PE14-09) to March 2014 (PE14-14). The purpose of the deployment was to examine the in situ degradation of oil. The deployment contained flow-through chambers of sediment, one amended with oil and one unamended. Samples were collected from the beginning and end of the experiment.

Sampling Description

Sampling

This dataset contains the bacterial and archaeal 16S rRNA sequence information from the Methane Microbial Observatory for Seafloor Analysis (MIMOSA) deployment at GC600 from October 2013 (PE14-09) to March 2014 (PE14-14). The purpose of the deployment was to examine the in situ degradation of oil. The deployment contained flow-through chambers of sediment, one amended with oil and one unamended. Samples were collected from the beginning and end of the experiment.

Method steps

  1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
Bigelow Laboratory for Ocean Sciences
metadata author
Bigelow Laboratory for Ocean Sciences
administrative point of contact
Bigelow Laboratory for Ocean Sciences
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