Microorganismos asociados con la filósfera de plantas de Espeletia en el PNN los Nevados
Citation
Zambrano M M, Ruiz C, Acosta I C, Colombia S, Cantillo A (2020). Microorganismos asociados con la filósfera de plantas de Espeletia en el PNN los Nevados. Version 1.5. Corporación CorpoGen. Occurrence dataset https://doi.org/10.15472/avygwj accessed via GBIF.org on 2024-12-12.Description
These microorganisms were collected from the phyllosphere of Espeletia plants located in paramo ecosystems in the National Natural Park Los Nevados. The work was part of the Colombian Center of Genomics and Bioinformatics, GEBIX, a research consortium than worked on metagenomics and bioprospecting from 2008 to 2014.Purpose
These strains were obtaine to have a collection of microorganisms from plants in the páramo ecosystems in order to study possible adaptations to harsh environmental conditions such as resistance to UV and daily temperature changes.
Sampling Description
Study Extent
Microbial isolates were obtained from Espeletia leaves sampled from plants located in páramo ecosystems (04°52'27'' N 75°15'51.4'' W).Sampling
Leaf samples from various plant parts were taken, in triplicate, and transported to the lab where they were processed to recover culturable microorganisms and DNA.Method steps
- Microbes were recovered from leaf surfaces by plating on solid R2A Agar (Difco) and Tryptone soy agar (TSA, Oxoid), and incubating several days at 25ºC. Strains were purified by re-streaking, characterized by growth on various media, and checked for the ability to withstand UVC and temperature changes. Strains were identified by sequence analysis of either the 16S rRNA gene or the ITS region.
Taxonomic Coverages
Microorganismos pertencientes a Bacteria y Eukarya, en la mayoría a nivel de género.
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Bacteriarank: domain
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Eukaryarank: domain
Geographic Coverages
The samples were collected at a specific location within the PNN los Nevados (04°52'27'' N 75°15'51.4'' W). This park is located on the Cordillera Central in Colombia, it has altitudes between 2,600 and 5,321 m.a.s.l., and an area of approximately 58,300 hectares with diverse ecosystems (Van Wyngaarden, W., & Fandiño, M. 2002). It is located within the Departments of Caldas (Municipio de Villamaría), Risaralda (Municipios de Santa Rosa de Cabal y Pereira), Quindío (Municipio de Salento) and Tolima (Municipios de Ibagué, Anzoátegui, Santa Isabel, Murillo, Villahermosa, Casabianca y Herveo)(www.parquesnacionales.gov.co/).
Bibliographic Citations
- Ruiz-Pérez CA, Restrepo S, Zambrano MM. 2016. Microbial and functional diversity within the phyllosphere of Espeletia species in an Andean high-mountain ecosystem. Appl Environ Microbiol 82:1807–1817 - doi:10.1128/AEM.02781-15
- Van Wyngaarden, W., & Fandiño, M. (2002) Parque Nacional los Nevados. Un caso de selección y zonificación de áreas de conservación biológica. In Serie Investigación 4. Javergraf (ed.) Bogotá - Colombia: Pontificia Universidad Javeriana. -
Contacts
María Mercedes Zambranooriginator
position: Directora Científica
Corporación Corpogen
Carrera 5 #66A-34
Bogotá
110231
DC
CO
Telephone: 57-1-8050122
email: mzambrano@corpogen.org
homepage: http://www.corpogen.org
userId: http://orcid.org/0000-0002-0796-4473
Carlos Ruiz
originator
position: Investigador
Corporación Corpogen
Carrera 5 #66A-34
Bogotá
110231
DC
CO
Telephone: 57-1-8050122
homepage: http://www.corpogen.org
Ivan Camilo Acosta
originator
position: Investigador
Corporación Corpogen
Carrera 5 #66A-34
Bogotá
110231
DC
CO
Telephone: 57-1-8050122
homepage: http://www.corpogen.org
SiB Colombia
metadata author
email: sib@humboldt.org.co
María Mercedes Zambrano
metadata author
position: Directora Científica
Corporación Corpogen
Carrera 5 #66A-34
Bogotá
110231
DC
CO
Telephone: 57-1-8050122
email: mzambrano@corpogen.org
homepage: http://www.corpogen.org
userId: http://orcid.org/0000-0002-0796-4473
Angela Cantillo
metadata author
position: Investigadora
Corporación Corpogen
Bogotá
CO
Corporación Corpogen
author
Corporación Corpogen
Carrera 5 #66A-34
Bogotá
110231
CO
Telephone: 18050122
email: corpogen@corpogen.org
María Mercedes Zambrano
administrative point of contact
position: Directora Científica
Corporación Corpogen
Carrera 5 #66A-34
Bogotá
110231
DC
CO
Telephone: 57-1-8050122
email: mzambrano@corpogen.org
homepage: http://www.corpogen.org
userId: http://orcid.org/0000-0002-0796-4473