FIOCRUZ | Geographical distribution of American cutaneous leishmaniasis and its phlebotomine vectors (Diptera: Psychodidae) in the state of São Paulo, Brazil
Citation
Shimabukuro P, da Silva T R R, Fonseca F O R, Baton L A, Galati E A B (2024). FIOCRUZ | Geographical distribution of American cutaneous leishmaniasis and its phlebotomine vectors (Diptera: Psychodidae) in the state of São Paulo, Brazil. Version 1.2. FIOCRUZ - Oswaldo Cruz Foundation. Occurrence dataset https://doi.org/10.15468/sgwq8p accessed via GBIF.org on 2024-12-15.Description
American cutaneous leishmaniasis (ACL) is a re-emerging disease in the state of São Paulo, Brazil. To understand both the vector and disease distribution we used an initial step in applying geographic information systems (GIS) and remote sensing (RS) tools to map disease-risk. A dataset containing 910 individual records of sand fly occurrence in the state of São Paulo, from 37 different sources, was compiled. These records date from between 1943 to 2009, and describe the presence of at least one of the six incriminated or suspected sand fly vector species in 183/645 (28.4%) municipalities. For the remaining 462 (71.6%) municipalities, we were unable to locate records of any of the six incriminated or suspected sand fly vector species (Nyssomyia intermedia, N. neivai, N. whitmani, Pintomyia fischeri, P. pessoai and Migonemyia migonei).
Sampling Description
Study Extent
São Paulo state, BrazilSampling
We collated and systematically organized into a single database the disparate data already available on the distribution of sand flies in the state of São Paulo. The distribution of sand flies (Nyssomyia intermedia, N. neivai, N. whitmani, Pintomyia fischeri, P. pessoai and Migonemyia migonei) was based on: (i) examination of material deposited at reference entomological collections (Museu de Zoologia da Universidade de São Paulo, and Departamento de Epidemiologia/Faculdade de Saúde Pública/Universidade de São Paulo), (ii) scientific publications (papers, reports, theses), (iii) the Superintendência de Controle de Endemias/SES database [51], and (iv) personal communication with Dr. Claudio Casanova (SUCEN). The data on the incidence of ACL in the state of São Paulo were obtained from, and are available at, the National Database on Reportable Diseases/Epidemiological Surveillance Centre SINAN/CVE website [21]. We used all the data from notified ACL cases from 1998-2007.Quality Control
All sand fly taxonomy was updated according to the classification of Galati (2003, 2018),Method steps
- Data were compiled in a Microsoft ACCESS 2007™ database, so that it was compatible with the software ArcGIS version 9.3 (Environmental Systems Research Institute, Inc., Redlands, California, United States), used in geoprocessing. This information was exported to the Databases Managing System (SGBD) POSTGRESQL. The POSTGRESQL software allows queries using SQL language to quantify and qualify the data. The queries were generated to visualize an event, such as distribution of a given species. The intervals describing the level of the incidence of ACL in Figures 2, 3, 4, 5, 6, 7 to distribute ACL data were: low (1 to 10), low-medium (10 to 29), medium (30 to 79), medium-high (80 to 147), and high (148 to 4680). From the ARCGIS 9.3 package, the ARCMAP and ARCCATALOG applications were used with tools from the ARCTOOLBOX, specific for geoprocessing.
Taxonomic Coverages
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Phlebotominaecommon name: sand fly rank: subfamily
Geographic Coverages
Bibliographic Citations
Contacts
Paloma Shimabukurooriginator
position: Researcher
Fiocruz
BR
email: paloma.helena@fiocruz.br
userId: http://orcid.org/0000-0002-5114-953X
Túllio Romão Ribeiro da Silva
originator
position: Researcher
Universidade Estadual do Amazonas
BR
userId: http://scholar.google.com/citations?user=https://www.researchgate.net/profile/Tullio-Silva
Frederico Octávio Ribeiro Fonseca
originator
position: Researcher
Instituto Nacional de Pesquisas da Amazônia
BR
userId: https://www.linkedin.com/profile/view?id=https://br.linkedin.com/in/frederico-oct%C3%A1vio-ribeiro-fonseca-1520572b/en
Luke Anthony Baton
originator
position: Researcher
Fiocruz
BR
userId: https://orcid.org/0000-0003-4515-8867
Eunice Aparecida Bianchi Galati
originator
position: Professor
Universidade de São Paulo
BR
userId: https://orcid.org/0000-0003-4662-281X
Paloma Shimabukuro
metadata author
position: Researcher
Fiocruz
BR
email: paloma.helena@fiocruz.br
userId: http://orcid.org/0000-0002-5114-953X
Paloma Shimabukuro
administrative point of contact
position: Researcher
Fiocruz
BR
email: paloma.helena@fiocruz.br
userId: http://orcid.org/0000-0002-5114-953X