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Sediment Metagenome

Citation

MGnify (2018). Sediment Metagenome. Sampling event dataset https://doi.org/10.15468/dsykih accessed via GBIF.org on 2019-11-13.

Description

This study presents an evaluation of the impacts of DNA extraction methods, targeted 16S rRNA hypervariable regions and sample origins on the microbial diversity detected by 454-pyrosequencing in sediments from cold seep and hydrothermal vent ecosystems

Sampling Description

Sampling

This study presents an evaluation of the impacts of DNA extraction methods, targeted 16S rRNA hypervariable regions and sample origins on the microbial diversity detected by 454-pyrosequencing in sediments from cold seep and hydrothermal vent ecosystems

Method steps

  1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
BioProject
metadata author
BioProject
administrative point of contact
BioProject
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