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marine sediment metagenome Raw sequence reads

Citation

MGnify (2018). marine sediment metagenome Raw sequence reads. Sampling event dataset https://doi.org/10.15468/1elvjp accessed via GBIF.org on 2022-06-28.

Description

The Roseobacter group within the family Rhodobacteraceae consists of nearly 70 genera and app. 180 species. They thrive in a broad variety of marine habitats and were found free-living in seawater, associated with micro and macro algae, marine sponges and invertebrates as well as in biofilms, sea ice and sediments. n the present study, we describe the abundance, distribution and diversity of the Roseobacter group in rather oligotrophic deep-sea sediments derived from the Pacific Ocean as all other benthic studies were performed on relatively eutrophic coastal sites or high-energy systems.

Sampling Description

Sampling

The Roseobacter group within the family Rhodobacteraceae consists of nearly 70 genera and app. 180 species. They thrive in a broad variety of marine habitats and were found free-living in seawater, associated with micro and macro algae, marine sponges and invertebrates as well as in biofilms, sea ice and sediments. n the present study, we describe the abundance, distribution and diversity of the Roseobacter group in rather oligotrophic deep-sea sediments derived from the Pacific Ocean as all other benthic studies were performed on relatively eutrophic coastal sites or high-energy systems.

Method steps

  1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
BioProject
metadata author
BioProject
administrative point of contact
BioProject
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