Copepod induced bacterial community Raw sequence reads

doi:10.15468/s0haiz

Copepod induced bacterial community Raw sequence reads

Citation

MGnify (2019). Copepod induced bacterial community Raw sequence reads. Sampling event dataset https://doi.org/10.15468/s0haiz accessed via GBIF.org on 2024-12-12.

Description

Live copepods from the North Atlantic subtropical gyre were collected and rinsed to be used in bioassay-type experiments. Bacteria present in various seawater and copepod treatments were analyzed by targeting the 16S rRNA V3-V4 region. In this study, copepods were observed to increase growth of bacteria which were released to their surroundings. Additionally, copepods may be responsible for inhibiting or inducing growth of specific bacterial groups.

Sampling Description

Sampling

Live copepods from the North Atlantic subtropical gyre were collected and rinsed to be used in bioassay-type experiments. Bacteria present in various seawater and copepod treatments were analyzed by targeting the 16S rRNA V3-V4 region. In this study, copepods were observed to increase growth of bacteria which were released to their surroundings. Additionally, copepods may be responsible for inhibiting or inducing growth of specific bacterial groups.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
University of Massachusetts Dartmouth

metadata author
University of Massachusetts Dartmouth

administrative point of contact
University of Massachusetts Dartmouth