We’re sorry, but GBIF doesn’t work properly without JavaScript enabled.
Our website has detected that you are using an outdated insecure browser that will prevent you from using the site. We suggest you upgrade to a modern browser.
{{nav.loginGreeting}}
  • Get data

      • Occurrences
      • Species
      • Datasets
      • Publishers
      • Trends
      • Citation guidance
  • Share

      • Publishing data
      • Dataset classes
      • Data quality
      • Data hosting
      • Become a publisher
      • Standards
      • Data papers
      • Citizen science
  • Tools

    • Publishers

      • IPT
      • Data validator
      • Suggest a dataset
      • Data repository

    • Users

      • GBIF API
      • Data processing
      • rgbif
      • MAXENT
      • Tools catalogue

    • GBIF labs

      • Species matching
      • Name parser
      • Sequence ID
      • Relative observation trends
      • GBIF data blog
  • Inside GBIF

    • About

      • What is GBIF?
      • The GBIF network
      • Become a member
      • Governance
      • Funders
      • Partnerships
      • Strategic plan
      • Contacts

    • News & outreach

      • News
      • Featured data use
      • Events
      • Ebbe Nielsen Challenge
      • Young Researchers Award
      • Newsletters and lists
      • Mentoring
      • Ambassadors
      • Community forum

    • Programmes & projects

      • CESP: Capacity Enhancement Support Programme
      • BID: Biodiversity Information for Development
      • BIFA: Biodiversity Information Fund for Asia
      • Northern Eurasia
      • Living Atlases
  • Admin

      • Registry console
  • User profile

MiSeq 16S rRNA gene (Thaumarchaeota 16S rRNA gene) sequences of 12 SCS sediments

Dataset homepage

Citation

MGnify (2019). MiSeq 16S rRNA gene (Thaumarchaeota 16S rRNA gene) sequences of 12 SCS sediments. Sampling event dataset https://doi.org/10.15468/npawu5 accessed via GBIF.org on 2020-01-24.

Description

DNA from 12 SCS sediments have been extracted and amplified by THAUM494/958R primer pairs (for Thaumarchaeota 16S rRNA gene). The Thaumarchaeota communities of these 12 samples were obtained.

Sampling Description

Sampling

DNA from 12 SCS sediments have been extracted and amplified by THAUM494/958R primer pairs (for Thaumarchaeota 16S rRNA gene). The Thaumarchaeota communities of these 12 samples were obtained.

Method steps

  1. Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Contacts

originator
School of Biological Sciences, The University of Hong Kong
metadata author
School of Biological Sciences, The University of Hong Kong
administrative point of contact
School of Biological Sciences, The University of Hong Kong
What is GBIF? API FAQ Newsletter Privacy Terms and agreements Citation Acknowledgements
Contact GBIF Secretariat Universitetsparken 15 DK-2100 Copenhagen Ø Denmark