The InBIO Barcoding Initiative Database: Borkhausenia crimnodes Meyrick, 1912 (Lepidoptera, Oecophoridae), a southern hemisphere species resident in Portugal
Citation
Corley M, Ferreira S, Lvovsky A L, Rosete J, Sousa P, Beja P (2020). The InBIO Barcoding Initiative Database: Borkhausenia crimnodes Meyrick, 1912 (Lepidoptera, Oecophoridae), a southern hemisphere species resident in Portugal. Version 1.1. CIBIO (Research Center in Biodiversity and Genetic Resources) Portugal. Occurrence dataset https://doi.org/10.15468/8yge73 accessed via GBIF.org on 2024-12-06.Description
The dataset contains one record of the species Borkhausenia crimnodes (Lepidoptera, Oecophoridae) collected in continental Portugal in 2014. This species, a southern hemisphere moth, had not been recorded in Europe before. The specimen was detected and captured by direct search of the environment and preserved in 96% ethanol. A tissue sample, one leg, was removed to be used for DNA extraction. Sequencing of the 658 bp COI DNA barcode was conducted within the InBIO Barcoding Initiative (IBI) and the DNA sequence was submitted to BOLD (Barcode of Life Data System) and GenBank databases. The preserved specimen and DNA extract are deposited in the IBI collection at the CIBIO (Research Center in Biodiversity and Genetic Resources).Purpose
The InBIO Barcoding Initiative (IBI) aims to develop a reference collection of DNA barcoding sequences primarily covering Portuguese invertebrate taxa providing a tool in ecological studies.
Sampling Description
Study Extent
A single specimen was collected in Louriçal, in Continental Portugal, in 2014.Sampling
The Borkhausenia crimnodes specimen was captured in continental Portugal in 2014, by direct search of the environment. The captured specimen was preserved in 96% ethanol and stored at the InBIO Barcoding Initiative reference collection for downstream molecular analysis. The collected specimen was morphologically identified.Quality Control
The DNA barcoded specimen morphological identification was contrasted with the results of the Blast of the newly generated DNA barcode in BOLD Identification Engine. Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).Method steps
- The Borkhausenia crimnodes specimen was captured in a single locality of continental Portugal, during 2014.
- The specimen was captured by direct search of the environment. The captured specimen was preserved in 96% ethanol.
- The specimen was morphologically identified using a binocular stereoscopic microscope and resorting to available literature (Meyrick, 1912).
- A DNA barcode was sequenced from a tissue sample, one leg, that was removed. DNA was then extracted, and a 658 bp COI DNA barcode fragment was amplified and sequenced.
- The obtained sequence was submitted to BOLD and GenBank databases and the specimen morphological identification was contrasted with the results of the BLAST of the newly generated DNA barcode in BOLD Identification Engine.
- Prior submission to GBIF, data was checked for errors and inconsistencies with OpenRefine 3.3 (http://openrefine.org/).
Taxonomic Coverages
This dataset is composed of one specimen identified as Borkhausenia crimnodes (Lepidoptera, Oecophoridae), a moth species.
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Animaliarank: kingdom
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Arthropodarank: phylum
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Insectarank: class
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Lepidopterarank: order
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Oecophoridaerank: family
Geographic Coverages
Continental Portugal.
Bibliographic Citations
- Corley, M.F.V., Ferreira, S., Lvovsky, A.L. & Rosete, J. (2017). Borkhausenia crimnodes Meyrick, 1912 (Lepidoptera, Oecophoridae), a southern hemisphere species resident in Portugal. Nota Lepidopterologica, 40(1): 15–24. - https://doi.org/10.3897/nl.40.10938
- Meyrick, E. (1912). Descriptions of South American Micro-Lepidoptera. Transactions of the Entomological Society of London 1911: 673–718. - https://doi.org/10.1111/j.1365-2311.1912.tb02203.x
Contacts
Martin Corleyoriginator
position: Researcher
Pucketty Farm Cottage
Faringdon
SN7 8JP
Oxfordshire
GB
email: martin.corley@btinternet.com
userId: http://orcid.org/0000-0003-4240-8007
Sónia Ferreira
originator
position: Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: hiporame@gmail.com
userId: http://orcid.org/0000-0002-6884-3966
Alexander L. Lvovsky
originator
position: Senior Researcher
Zoological Institute, Russian Academy of Sciences
1 Universitetskaya Emb.
Saint Petersburg
Saint Petersburg
RU
email: Alexander.Lvovsky@zin.ru
userId: http://orcid.org/0000-0003-3165-6654
Jorge Rosete
originator
position: Researcher
Urbanização Lourisol, Rua Manuel Cerqueira Nobrega
Louriçal, Pombal
3105-165
Leiria
PT
email: roseteprof@gmail.com
userId: https://www.linkedin.com/profile/view?id=jorge-rosete-b34b4963
Pedro Sousa
originator
position: Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, R. Padre Armando Quintas, 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: pbeja@cibio.up.pt
userId: http://orcid.org/0000-0002-5859-9656
Pedro Beja
originator
position: Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, R. Padre Armando Quintas, 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: pbeja@cibio.up.pt
userId: http://orcid.org/0000-0001-8164-0760
Martin Corley
metadata author
position: Researcher
Pucketty Farm Cottage
Faringdon
SN7 8JP
Oxfordshire
GB
email: martin.corley@btinternet.com
userId: http://orcid.org/0000-0003-4240-8007
Sónia Ferreira
metadata author
position: Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: hiporame@gmail.com
userId: http://orcid.org/0000-0002-6884-3966
Alexander L. Lvovsky
metadata author
position: Senior Researcher
Zoological Institute, Russian Academy of Sciences
1 Universitetskaya Emb.
Saint Petersburg
Saint Petersburg
RU
email: Alexander.Lvovsky@zin.ru
userId: http://orcid.org/0000-0003-3165-6654
Jorge Rosete
metadata author
position: Researcher
Urbanização Lourisol, Rua Manuel Cerqueira Nobrega
Louriçal, Pombal
3105-165
Leiria
PT
email: roseteprof@gmail.com
userId: https://www.linkedin.com/profile/view?id=jorge-rosete-b34b4963
Pedro Sousa
metadata author
position: Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, R. Padre Armando Quintas, 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: psousa@cibio.up.pt
userId: http://orcid.org/0000-0002-5859-9656
Pedro Beja
metadata author
position: Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, R. Padre Armando Quintas, 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: pbeja@cibio.up.pt
userId: http://orcid.org/0000-0001-8164-0760
Pedro Beja
administrative point of contact
position: Coordinating Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, R. Padre Armando Quintas, 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: pbeja@cibio.up.pt
userId: http://orcid.org/0000-0001-8164-0760
Sónia Ferreira
administrative point of contact
position: Post-Doc Researcher
CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto
Campus Agrário de Vairão, Rua Padre Armando Quintas, nº 7
Vairão
4485-661
Porto
PT
Telephone: +351 252660411
email: hiporame@gmail.com
userId: http://orcid.org/0000-0002-6884-3966