Photo images, 3D models and CT scanned data of loaches (Botiidae, Cobitidae and Nemacheilidae) of Japan

Study Extent

Sampling

Method steps

1. Photo images were taken in the fields by capturing individuals (Kano and Nakajima 2014) and/or by snorkeling. The formalin-fixed specimens were also photographed in the laboratory followed by CT scanning (Aloka Latheta LCT-200, Hitachi, Ltd.). 3D surface (CT value: -400 to -40) and skeletal (CT value: 5 to 200) models were extracted from the CT data. The CT data in raw file format was also stored and available on the web.

1. Animalia
   common name: Animals rank: kingdom
2. Chordata
   common name: Chordates rank: phylum
3. Craniata
   common name: Vertebrat es and hagfishes rank: subphylum
4. Osteichthyes
   common name: Bony fishes and tetrapods rank: class
5. Cypriniformes
   common name: Carps, loaches, minnows and relatives rank: order
6. Botiidae
   common name: Botiid loach rank: family
7. Parabotia curtus
   common name: "Ayumodoki" rank: species
8. Cobitidae
   common name: True loaches rank: family
9. Cobitis kaibarai
   common name: "Ariake-suji-shima-dojyô" rank: species
10. Cobitis magnostriata
    common name: "Oogata-suji-shima-dojyô" rank: species
11. Cobitis matsubarae
    common name: "Yamato-shima-dojyô" rank: species
12. Cobitis sp. "yamato" complex Type A
    common name: "Yamato-shima-dojyô" (Type A) rank: species
13. Cobitis minamorii minamorii
    common name: "San'yô-kogata-suji-shima-dojyô" rank: subspecies
14. Cobitis minamorii oumiensis
    common name: "Biwa-kogata-suji-shima-dojyô" rank: subspecies
15. Cobitis minamorii saninensis
    common name: "San'in-kogata-suji-shima-dojyô" rank: subspecies
16. Cobitis minamorii tokaiensis
    common name: "Tôkai-kogata-suji-shima-dojyô" rank: subspecies
17. Cobitis minamorii yodoensis
    common name: "Tôkai-kogata-suji-shima-dojyô" rank: subspecies
18. Cobitis sakahoko
    common name: "Oyodo-shima-dojyô" rank: species
19. Cobitis shikokuensis
    common name: "Hina-ishi-dojyô" rank: species
20. Cobitis sp. BIWAE type A
    common name: "Oo-shima-dojyô" rank: species
21. Cobitis sp. BIWAE type B
    common name: "Nishi-shima-dojyô" rank: species
22. Cobitis sp. BIWAE type C
    common name: "Higashi-shima-dojyô" rank: species
23. Cobitis sp. BIWAE type D
    common name: "Tosas-shima-dojyô" rank: species
24. Cobitis striata fuchigamii
    common name: "Onga-suji-shima-dojyô" rank: subspecies
25. Cobitis striata hakataensis
    common name: "Hakata-suji-shima-dojyô" rank: subspecies
26. Cobitis striata striata
    common name: "Chûgata-suji-shima-dojyô" rank: subspecies
27. Cobitis takatsuensis
    common name: "Ishi-dojyô" rank: species
28. Cobitis takenoi
    common name: "Tango-suji-shima-dojyô" rank: species
29. Misgurnus sp. (Clade A)
    common name: "Kita-dojyô" rank: species
30. Misgurnus anguillicaudatus (Clade B1)
    common name: "Dojyô" (Japan clade) rank: species
31. Misgurnus anguillicaudatus (Clade B2)
    common name: "Dojyô" (China clade) rank: species
32. Misgurnus anguillicaudatus (jindai)
    common name: "Jindai-dojyô" rank: species
33. Misgurnus sp. IR
    common name: "Shinobi-dojyô" rank: species
34. Misgurnus sp. OK
    common name: "Hyoumon-dojyô" rank: species
35. Misgurnus dabryanus
    common name: "Kara-dojyô" rank: species
36. Niwaella delicata
    common name: "Ajime-dojyô" rank: species
37. Nemacheilidae
    common name: Stone loaches rank: family
38. Barbatula oreas
    common name: "Fuku-dojyô" rank: species
39. Lefua costata
    common name: "Hime-dojyô" rank: species
40. Lefua echigonia
    common name: "Hotoke-dojyô" rank: species
41. Lefua nikkonis
    common name: "Ezo-hotoke-dojyô" rank: species
42. Lefua sp. 1
    common name: "Nagare-hotoke-dojyô" rank: species
43. Lefua sp. 2
    common name: "Tôkai-nagare-hotoke-dojyô" rank: species