rgbif: an interface to the GBIF API for the R statistical programming environment

rgbif is an R package from rOpenSci that allows searching and retrieving data from GBIF. rgbif wraps R code around the GBIF API to allow you to talk to GBIF from R and access metadata, species names, and occurrences.

Installing the package in R is simple:

install.packages("rgbif")

Once installed, rgbif allows you to easily

  • get data for single occurrences

  • retrieve multiple occurences

  • search for taxon names

  • generate maps of occurences, e.g. Coffea arabica

Full functionality is described in the rgbif tutorial.  The rgbif package is also part of the SPOCC Species Occurrence Data suite, that provides access to occurrence records from multiple databases.

Tool: rgbif: an interface to the GBIF API for the R statistical programming environment

Thumbnail image for tool

Citations

Scott Chamberlain (2016). rgbif: Interface to the Global ‘Biodiversity’ Information Facility ‘API’. R package version 0.9.5. https://CRAN.R-project.org/package=rgbif