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- File
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- Involved datasets
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Scientific name Arcobacter Vandamme et al., 1991
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Download as TSV
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5kNahant Collection
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57US East Coast Salt Marshes Targeted Locus (Loci)
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17photoautotrophic_biofilm
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24aquatic bacterial metagenome Raw sequence reads
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1rDNA amplicon sequencing of Western North Atlantic microbial community
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16Sea water sample Targeted Locus (Loci)
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23Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea
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1Bacterial 16S rRNA gene sequencing of Antarctic soil
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11Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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14Atlantic salmon microbiota
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74Zooplankton communities in the coastal water of northeastern Hokkaido
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73Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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4Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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8CTD water column metabarcoding
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13marine sediment metagenome Raw sequence reads
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22Intertidal Mixing Zone Targeted Locus (Loci)
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2Trichodesmium spiralis associated microbiome Targeted loci
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13North Pacific Subtropical Gyre Microbial Community
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22Seawater Targeted Locus (Loci)
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229Macroalgal Morphology affects composition and settlement of microbial communities
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127Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem
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26Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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23Microbial associations in temperate marine copepods from the Gulf of Maine
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13Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan)
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81Marine metagenome Targeted loci environmental
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42Patagonian fjord prokaryote community
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5Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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12water Raw sequence reads
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1A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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4Diet analysis of Japanese sardine and Pacific round herring larvae
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39Bacterial Diversity in the East China Sea
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8marine sediment metagenome Raw sequence reads
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11Bacteria in domestic water-storage containers with or without mosquito larvae
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1Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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9Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes
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103Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
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10Community structure of Archaea in the western North Pacific and the Arctic Ocean
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1Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater
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3marine sediment metagenome Targeted loci environmental
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15Microbial community in marine sediments
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70Spirulina necromass degradartion in arctic marine sediments
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23Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis
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17Equatorial Pacific Ocean Targeted loci environmental
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9suspended particulate matter Raw sequence reads
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444Coral
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879Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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22Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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22Comparison of marine sediments from the Beguela upwelling zone
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18416S Amplicon Data from an Antarctic Cold Seep
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82Coastal seawater influenced by the municipal effluents Raw sequence reads
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86Meta_Kosmos
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140Bacteria exposure experiment North Sea
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23Microbial Processes and Biodiversity: OCEAN
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2Baltic Sea
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258EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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1marine sediment metagenome Raw sequence reads
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2A long-standing complex tropical dipole shapes marine microbial biogeography
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15the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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38marine sediment metagenome Metagenome
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7Biological rejuvenation of iron oxides in bioturbated marine sediments
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4Extracellular DNA marine sediment Targeted Locus (Loci)
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62Reciprocal transplantation experiment of salt marsh sediments Targeted loci
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23Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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14CCA_pathobiome
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45IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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268Little Sippewissett Marsh Targeted Locus (Loci)
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1Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon
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63Life in a toxic environment
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2Ocean sediment-basement interface Targeted Locus (Loci)
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13Soil16S
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60Standard filtration practices significantly distort planktonic microbial diversity estimates
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2kMICROBIS database
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23Marine sediment Raw sequence reads
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191Sediment surface microbial community changes due to phytoplankton addition
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4marine metagenome Targeted Locus (Loci)
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9Global Malaspina 2010 deep ocean expedition - rRNA pyrotags
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13Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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289Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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3Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO
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26peptide incubation in GOM C6 seawater bacteria Metagenome
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5A practical introduction to microbial molecular ecology through the use of iChips
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27Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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1ADDOMEx
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25marine sediment metagenome Targeted loci environmental
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10Marine bacteria metagenome
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76Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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5kMarine metagenomes Metagenome
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44Nuunat- ORMS formation during oil biodegradation at low temperature
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3Red Sea Zooplankton Raw sequence reads
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1Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay
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25Red Sea microbial plankton Raw sequence reads
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2De novo whole metagenome sequencing studies
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1Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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197Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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7Thermophilic endospores in temperate sediments
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66Bacterial Biogeography of Coastal Water in the Northern East China Sea
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100Mediterranean Contaminated Pelagic communities
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7ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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616S rRNA amplicon from marine Bacteria Raw sequence reads
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2Nitrate-storing microorganisms in sediments of the Bornholm Basin
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2816S_Sediment_Bolinao
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118Heterogeneity of methane seep microbiomes in the NE Pacific
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5Mediterranean mud volcano flow Targeted loci
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98Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
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135SCHEMA_Sediment
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60Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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8South China Sea interfaces 16S amplicon sequencing
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7marine Archaea metagenome
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5Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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4Marine metagenome ICM_GPS
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31Pelagic Gulf of Mexico Targeted loci environmental
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1Distribution of the Roseobacter clade
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2Microbial diversity studies of Arabian Sea sediment
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3Dark ocean microbial diversity
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3316S amplicons Subtropical Frontal Zone New Zealand
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11Gulf of Mexico open ocean Targeted Locus (Loci)
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14Sediment Metagenome
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13Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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15DDCA-metagenome
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2616S data describing Antarctic benthic sediment
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6Sea water microorganisms Raw sequence reads
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6Taxonomic study of endospores in a marine sediment
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27marine sediment metagenome Targeted loci environmental
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3Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea
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34Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
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2ocean bacteria Metagenomic assembly
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2Sediment bacteria in the Southern Ocean
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189Nutrient addition mesocosm experiment Targeted Locus (Loci)
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16Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015
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112Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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27Arctic first-year drift ice and under-ice water bacterial communities
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49Northern Gulf of Mexico Hypoxic Zone Raw sequence reads
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10Whale fall
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336Biological Impacts of Ocean Acidification
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115N methylamine SIP (WCO station L4)
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622Zostera Marina Ammonification environmental
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64Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean
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1Microbial diversity associated with copepods in the North Atlantic subtropical gyre
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4Bacterial diversity in the South Adriatic Sea during winter of 2016
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14marine sediment metagenome Raw sequence reads
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66Polymetallic nodule field Targeted loci environmental
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153Geographically tagged INSDC sequences
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157Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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25Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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5eDNA_Subseafloor
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18Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental
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18Marine methane seep Targeted Locus (Loci)
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10marine sediment metagenome Metagenome
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1UK coast natural seawater Genome sequencing
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29Incubation of marine methane seep sediments with a bioorthogonal amino acid
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52Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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9Microbial communities in marine surface water
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24Queensland Marine Sediment
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3gas hydrate bearing sediment Raw sequence reads
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26Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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5Diet analysis of Pacific Bluefin Tuna larvae
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66Sea spray aerosols at Three California Beaches
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71Xylophaga in situ Eclusion Experiment
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14marine metagenome Raw sequence reads
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124Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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1Ocean Acidification baceria sample Targeted loci environmental
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3Southern Ocean
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23Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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4Marine metagenome ICM_JRV
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10E1 Targeted Locus (Loci)
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14Caspian Sea Sediment - 16S Survey Targeted Locus (Loci)
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321DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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131Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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162Marine methane seep Targeted Locus (Loci)
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1Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia