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65Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015
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8Antarctic Lakes Brine Raw sequence reads
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64Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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15Mesocosm Targeted Locus (Loci)
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49Northern Gulf of Mexico Hypoxic Zone Raw sequence reads
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15Sinking bloom influences benthic microorganisms
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2Prince Edward Island marine metgenome Raw sequence reads
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3Microbial communities of methane seeps in shallow, porous sands off Elba
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416S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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88Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean
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62Polymetallic nodule field Targeted loci environmental
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4microbial communities in long-term e-waste contaminated river sediments
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5XRCWU sediment metagenome Metagenome
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2Enrichment metagenome
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1Surfactant-associated bacteria in the near-surface layer of the ocean
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53Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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33eDNA_Subseafloor
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52Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental
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18Marine methane seep Targeted Locus (Loci)
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62Incubation of marine methane seep sediments with a bioorthogonal amino acid
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18PREsediment Targeted Locus (Loci)
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4Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay
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452Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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2Pyrosequencing of bacterial community
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5Vertical profiles of bacterial community diversity in a drinking water reservoir
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8Compost microbe establishment and growth in agricultural soils
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48Microbial community in PAH-contaminated riverine sediments
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1Marine metagenome ICM_LCR
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17Microcosms Metagenome
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3Transitional subsurface-to-surface microbial diversity in a terrestrial serpentinizing seep (Manleluag, Pangasinan, the Philippines)
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335Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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31coastal sediment diversity study
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110Bacteria community in the southern East China Sea
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23marine sediment metagenome Raw sequence reads
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6Metabarcoding surveys of the Arctic marine environment
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36Soil metagenome from healthy and unhealthy agricultural soil
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24Fe3+ and Mn4+ - induced changes in microbial communities of boreal lake sediments
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15Fluctuating redox regimes raw sequence reads
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74Coastal Sediment Bacterial Community Alterations in Association with Sudden Vegetation Dieback
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3Effect of climate-change induced glacier melting on the benthic prokaryotic diversity in the West Antarctic Peninsula
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1Uranium reducing microbial consortia, under alkaline conditions relevent to geological disposal
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17Marine Metagenome
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4DSMZ Bacteria
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7Study of microbial diversity from sediment samples of the SaiGon-DongNai system
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1Microbial communities in deep eastern Mediterranean Sea surface sediments
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59Bacterial 16S rRNA gene sequencing of Antarctic soil
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9Water and Sediment samples Targeted loci environmental
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15Atlantic salmon microbiota
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132It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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1916s data marine community of L4 station
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18The Indigo Project: a global citizen science Ocean survey
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16Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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116S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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6pyrosequencing Raw sequence reads of deep-sea Archaea
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1Mid-Atlantic Ridge sediment Raw sequence reads
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334Temporal variation in pesticide biodegradation
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8Sediment river Genome sequencing and assembly
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29North Pacific Subtropical Gyre Microbial Community
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8Development and validation of a marine experimental life support system for accessing synergistic effects of climate change and oil pollution on microbial communities
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3nirS-Encoding and nirK-Encoding Denitrifiers in the Sediment of Daya Bay Raw sequence reads
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2Seawater Targeted Locus (Loci)
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82Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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219Macroalgal Morphology affects composition and settlement of microbial communities
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8Spatially differing bacterial communities in water columns of the northern Baltic Sea
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38Salt Marsh Sediments Raw sequence reads
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71Arctic microbiome along Svalbard Cross Shelf transects
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43Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing
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1kBacerial and archaeal diversity in Central Park
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41Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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40Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan)
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87Marine metagenome Targeted loci environmental
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4AllDist Targeted Locus (Loci)
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6Controls on microalgal community structures in cryoconite holes upon high Arctic glaciers, Svalbard
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3Protists community in the southern East China Sea
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4Svalbard Targeted Locus (Loci)
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25CEFS_16S_ITS
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34Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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11Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC
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5XRCWD sediment metagenome Metagenome
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12sediment metagenome Metagenome
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12Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes
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11BACTERIAL COMMUNITIES IN THE ACID AND THERMOPHILIC CRATER-LAKE OF THE VOLCANO "EL CHICHON", MEXICO
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66Oceanic microplankton do not adhere to the latitudinal diversity gradient
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68Spirulina necromass degradartion in arctic marine sediments
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37Microbial community in marine sediments
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1Japan Collection of Microorganisms(Bacteria)
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9magnetite Targeted Locus (Loci)
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69Biogeography of coastal wetland bacterial communities experiencing sudden vegetation dieoff
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4Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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6Equatorial Pacific Ocean Targeted loci environmental
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1Ecological Genomics of the Eastern Tropical South Pacific Oxygen Minimum Zone Metagenome
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3Localized impact of aquaculture effluent on Red Sea coral reef water nutrients and microorganisms
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5Microbial diversity of Oslo Fjord Pockmark sediments
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2Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging
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709Zostera Marina Ammonification environmental
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69Tyne oil spill snorkels Raw sequence reads
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1kOrganic agricultural field soil Raw sequence reads
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4Canada Basin Metagenome
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237Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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74Geographically tagged INSDC sequences
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61Temporal dynamics of bacterioplankton community in response to excessive nitrate loading in the oligotrophic coastal water
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4Coral Spawn Degradation, Bocas del Toro, Panama - Raw sequence reads
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4marine sediment metagenome Raw sequence reads
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2Bacteria Metagenome
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7Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) North Pacific Line-67 2009
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7Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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22011 depth sediment Metagenome
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25Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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2A comparison of microbial community composition in four contrasting sediments in the Celtic Sea
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4SOLA Raw sequence reads
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1Diesel contamination of Antarctic soils and sediments
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7May 2013 DNA-SIP marine seawater bacteria metagenomic assembly
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5Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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43North Sea plastic incubation and reference communities, raw sequence reads
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10seawater metagenome
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2Global Ocean Sampling Expedition
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26Evidence of bacterioplankton community adaption in responses to long-term mariculture disturbance
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39Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Caribbean Sea near Curacao (including saline pond samples in Curacao) 2015
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19Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)
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34particle-attached and free-living bacteria kongsfjorden
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41Saltern of Margherita di Savoia Metagenome
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141DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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17South China Normal University mangrove sediment Targeted Locus (Loci)
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22Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans
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38US East Coast Salt Marshes Targeted Locus (Loci)
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11Narragansett Bay, RI Sediments Targeted Locus (Loci)
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1sediment microorganism Metagenome
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3Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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1Mud volcano Metagenome
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9permafrost metagenome Targeted loci environmental
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16marine sediment metagenome Metagenome
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3Abalone seed nursing ecosystem Metagenome
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5CTD water column metabarcoding
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2Lakes ediments of the Amazon River system Raw sequence reads
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25marine sediment metagenome Raw sequence reads
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4Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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1Microbial diversity
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66Intertidal Mixing Zone Targeted Locus (Loci)
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5XRU sediment metagenome Metagenome
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2Metagenomic sequence from soil bacteria
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1Long distance electron transfer by cable bacteria in aquifer sediments
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1716S rRNA Analysis of Osaka Bay Microbiomes
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46coastal sediments Targeted Locus (Loci)
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3Eukaryotic diversity in Central Park
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73Patagonian fjord prokaryote community
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13Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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41Bacterial biogeography of a High Arctic ice cap
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115Marine metagenomes from the bioGEOTRACES project
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25Studies of marine microbial dark matter
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9Bacteria in domestic water-storage containers with or without mosquito larvae
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9marine sediment metagenome Raw sequence reads
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11Qinghai Lake sediments Metagenome
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35Microbiome profiling Schlöppnerbrunnen peat cores from different depths
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6Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater
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13microbial community diversities of Tuosu Lake
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3dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment
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35Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis
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63Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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2Amino acid addition experiment Metagenome
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31Comparison of marine sediments from the Beguela upwelling zone
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25116S Amplicon Data from an Antarctic Cold Seep
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45Temporal sampling of marine metagenomes from Station ALOHA and BATS
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24Baltic Sea
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1Amplicon sequencing of gyrA and parC in Escherichia communities in river/lake sediments
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2Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India
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4Marine sponges and seawater Targeted Locus (Loci)
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249Soil marker gene sequences across the Nutrient Network
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1DOM nutrient stress experiment bacterial communities
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47soil metagenome Raw sequence reads
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25environmental sample sequencing
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1Registros biológicos en áreas protegidas obtenidos de documentos impresos
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32mangrove rhizosphere sediment Metagenome Raw sequence reads
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4sediment metagenome Raw sequence reads
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3Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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5Uncultured Environmental Isolate Targeted loci environmental
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4marine sediment Raw sequence reads
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216S rRNA gene pyrosequencing and clone library revealed highly diverse microbial communities in natural marine biofilms
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98Life in a toxic environment
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14Genetic potential for pentachlorophenol degradation at historically contaminated groundwater sites
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2Polyamine-transforming bacterioplankton in seawater
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8Microbial community structure of chronically polluted marine sediments from a cold region of the southern hemisphere
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2Bacterial communities from Thrombolites of Lake Sarmiento
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2DOW-2
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5Boreal lake sediment 16S rRNA gene amplicon (454-pyrosequencing) raw sequence reads
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35Microbial community in on-site tsunami sediment caused by the Great East Japan Earthquake
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248Sediment surface microbial community changes due to phytoplankton addition
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6Global Malaspina 2010 deep ocean expedition - rRNA pyrotags
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139Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments
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1Particulate methane monooxygenase diversity on an Arctic shelf
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1Sediment samples Raw sequence reads
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33Diversities of bacteria and archaea in Sanya mangrove sediments
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42Microbial communities in the phycosphere environment
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16Seawater metagenome Targeted loci environmental
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601Soil bacterial diversity is associated with human population density in urban greenspaces
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34Effects of triclosan on bacterial community composition in natural seawater microcosms
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27peptide incubation in GOM C6 seawater bacteria Metagenome
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4Indian_sediments
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20Municipal Pensacola Beach Sand Metagenome
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2Soil microbial distribution
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7ZRD sediment metagenome Metagenome
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13marine sediment metagenome Raw sequence reads
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62Nuunat- ORMS formation during oil biodegradation at low temperature
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4soil bacteria and fungi Targeted loci environmental
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17Microbial ecology of bacteiral community in sediment from adjacent waters of Rushan Bay
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2De novo whole metagenome sequencing studies
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1DSW-2
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1Metagenomics of Ojo de Campo
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1Bacterial community composition in the naturally iron-fertilized region off Kerguelen Island (Southern Ocean). Targeted Locus (Loci)
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1Marine waters Raw sequence reads
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17Coastal eutrophication controls the bacterial community composition in different reef habitats of the Spermonde Archipelago, Indonesia.
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33Thermophilic endospores in temperate sediments
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172Bacterial Biogeography of Coastal Water in the Northern East China Sea
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4seawater metagenome Metagenome
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6Bacterial community diverisity
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6Sediment Metagenome
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40DDCA-metagenome
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2Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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1USS-2
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65marine sediment metagenome Targeted loci environmental
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60Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene
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3Marine plankton Metagenome
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2Bacterial community shift in the coastal Gulf of Mexico salt-marsh sediment microcosm in vitro following exposure to the Mississippi Canyon Block 252 oil (MC252)
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7Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia
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68Arctic first-year drift ice and under-ice water bacterial communities
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819Biological Impacts of Ocean Acidification
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1Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns
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2Microbial diversity of marine sediments from Ross Sea
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13coastal suspended particulate matter North Sea surface Raw sequence reads
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27marine sediment metagenome Raw sequence reads
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88Temperature shifts simulating secondary oil recovery
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1seawater metagenome Metagenome
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2916S rRNA amplicon sequences of Baltic Sea bacterioplankton
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4Tucurui_Metagenoma_MGRAST
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3UK coast natural seawater Genome sequencing
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3616S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper
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2Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.
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71Queensland Marine Sediment
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1gas hydrate bearing sediment Raw sequence reads
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16Salt marshes sediment microhabitats Metagenome
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4Marine sediment amplicon Targeted loci environmental
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2Sediment microbial community Random survey
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4Microbial diversity before and after tidal re-instatement
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8Sea microbial community Metagenome
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72Camargue soil and sediment 16S community profiling
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6ZRM sediment metagenome Metagenome
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23marine metagenome Raw sequence reads
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19Santa Barbara Basin Raw sequence reads
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516S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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1marine metagenome
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25Newfoundland sediment pyrosequencing
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65Microbial community response on waste water discharge in recipient freshwater sediments
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4Microbial communities associated with ferromanganese nodules and the surrounding sediments
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10This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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31)sediments; 2) coral floc Metagenome
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10marine sediment metagenome Raw sequence reads
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6Hot springs Metagenome
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7Natural seawater bacterial community in exopolysaccharides utilization
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11Microbial community in permeable intertidal sediment
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4Seawater free living bacterioplankton
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3Cave sediment Metagenome
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30photoautotrophic_biofilm
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9Depth profile of ancient sediments
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1Lake Washington sediment enrichments
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26Marine Sediment Targeted Locus
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123Sea water sample Targeted Locus (Loci)
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7Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads
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13surface sediment Raw sequence reads
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5Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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74Lake sediment sequencing
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72Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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1DOS-1
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5Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes
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6Microbial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait)
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13Trichodesmium spiralis associated microbiome Targeted loci
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6Impact of rainforest transformation on phylogenetic and functional diversity of soil prokaryotic communities in Sumatra (Indonesia)
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10Saltern microbial community diversity
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29Microbial associations in temperate marine copepods from the Gulf of Maine
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333EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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1Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing
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5016S sequencing of environmental samples to test the impact of sediment source
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41Taxonomic composition of microbial communities in coastal Arctic sediments
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2marine sediment metagenome Metagenomic assembly
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11Metagenome from mudbank Area,Alappuzha Kerala India
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14Groundwater microbiome
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56Reciprocal transplantation experiment of salt marsh sediments Targeted loci
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14MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments
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120Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments
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18CCA_pathobiome
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143Little Sippewissett Marsh Targeted Locus (Loci)
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7Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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11Sewer sediments Targeted loci environmental
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9sediment metagenome Metagenome
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6Aldegondabreen cryoconite Targeted Locus
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14Microbial community diversity in Arctic marine sediments and Planktonic microbial
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1Ocean sediment-basement interface Targeted Locus (Loci)
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3Funtonal metagenomic of salt resistance
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11Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252)
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19marine sediment metagenome Raw sequence reads
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6Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads
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42Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania
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6Benham Rise 16S raw sequence reads
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2Oil-water intephase microbial community analysis Raw sequence reads
-
94916S amplicons New Zealand agricultural soils
-
87sediment metagenome Raw sequence reads
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3Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion
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4XRM sediment metagenome Metagenome
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171Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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26A practical introduction to microbial molecular ecology through the use of iChips
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7Minor impact of ocean acidification to the structure of an Arctic sediment microbial community
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65Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
-
516S rDNA metagenomes of Western Balkans glacial lakes sediments
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11Sediment metagenome
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714Microbial communities associated with Eurasian watermilfoil, water and sediment
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3water sample Raw sequence reads
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35Future climate change affects the microbiome and condition of habitat-forming kelp
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12uncultured prokaryote Targeted loci environmental
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23Marine bacteria metagenome
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2Surface sediment raw sequence reads 1
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103Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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3Shallow-water pockmarks diversity Targeted Locus (Loci)
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1Seawater bacteria Metagenome
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2Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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9marine sediment metagenome Raw sequence reads
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1516S rRNA amplicon from marine Bacteria Raw sequence reads
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54Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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9envinronment Metagenome
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1Amplicon sequences from naphthalene biodegradation in Arctic and temperate seawater
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4Microbial processes in iron-rich sediments of Lake Towuti, Indonesia: Disentangling the methane and iron cycles
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1016S amplicons Subtropical Frontal Zone New Zealand
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2Gulf of Mexico open ocean Targeted Locus (Loci)
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4Comparison of copper contaminated soils, with similar uncontaminated controls.
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32Taxonomic study of endospores in a marine sediment
-
9Sea water microorganisms Raw sequence reads
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1Marine subseafloor sediment Targeted Locus (Loci)
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6seawater metagenome Raw sequence reads
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4Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin)
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4ocean bacteria Metagenomic assembly
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94Nutrient addition mesocosm experiment Targeted Locus (Loci)
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3Swan lake bacteria Raw sequence reads
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137Marine methane seep Targeted Locus (Loci)
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5Spatial variation of bacterioplankton in south Atlantic Bight
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20Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes
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2Microbial community structure or iron oxyhydroxides rich mound in Satsuma Iwo-jima, Japan
-
2Illumina high-throughput sequencing of bacterial community
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3Mudflat sediment Metagenome
-
112Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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3Benthic Ocean Acidification
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21microbial diversity Raw sequence reads
-
6ZRCWD sediment metagenome Metagenome
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25resuscitation mechanisms during enrichment culture
-
9sea water bacteria Raw sequence reads
-
33Marine sediment microbial communities in the presence of macrophytes
-
8Marine bacteria Targeted Locus (Loci)
-
15Rifle sediment bacterial community Targeted Locus (Loci)
-
48California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental
-
46Limited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters
-
233Bacterial Diversity in the East China Sea
-
2CPN Metagenome
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14marine sediment metagenome Raw sequence reads
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173Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
-
10Bacterial community of cold seeps Metagenome
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12marine metagenome Targeted loci environmental
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3Microbial Diversity in the Southwest Atlantic Ocean and Patagonian Freshwater Bodies
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30Variation in freshwater stream sediment community 16S rRNA profiles along an urbanization gradient
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271Bacteria exposure experiment North Sea
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37Microbial Processes and Biodiversity: OCEAN
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4marine sediment metagenome Raw sequence reads
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19Diversity and composition of sediment microbial assemblages in an Atlantic port environment
-
17Freshwater sediment Raw sequence reads
-
2solar evaporation pond sample Metagenome
-
3NEON Surface Water Microbe Marker Gene Sequences - 2014
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8Planktonic bacterial communities in the arctic Canada Basin and Kongsfjorden
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36the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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1BSM marine Targeted Locus
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52Sediment of acid mine drainage Targeted loci environmental
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4Microbiome variation in Agaricia undata with distinct depth distribution ranges
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1IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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80Marine Bacteria 16S V4 Raw sequence reads
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4marine metagenome Targeted Locus (Loci)
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7Metagenomics of Jacarepagua Lagoon
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63Soil16S
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18Arctic benthos Targeted Locus (Loci)
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3Standard filtration practices significantly distort planktonic microbial diversity estimates
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2Variable Loading Conditions Influence Charge and Current Generation in Multi-Anode Environmental Microbial Fuel Cells
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31Marine sediment Raw sequence reads
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26Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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17Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO
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64Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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8seawater metagenome Genome sequencing and assembly
-
13seawater bacterial community Raw sequence reads
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7Methanogens and iron-reducing bacteria are major contributors to mercury methylation in boreal lake sediments
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52PAH-contaminated sediment from the Lagos Lagoon, Nigeria
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12ADDOMEx
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1Sediment bacterial 16S in Hachiro polder.
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2Coral or reef-seawater associated bacteria Targeted Locus (Loci)
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3marine metagenome Raw sequence reads
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59Mediterranean Contaminated Pelagic communities
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117ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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2Hypersaline sapropels Targeted loci environmental
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72MeHg Coal Ash
-
121Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
-
57Chandeleur Island 2016 Amplicon Study Raw sequence reads
-
1marine Archaea metagenome
-
78Time course change of microbial community in tsunami sediment caused by the Great East Japan Earthquake
-
5Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
-
1Pelagic Gulf of Mexico Targeted loci environmental
-
9VAG Mine Pit Pond Metagenome
-
6PCE/TCE dechlorinating microbial community and dehalogenase genes from Wonju Stream, South Korea
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2The effect of salinity in prokaryotic communities in an estuary
-
2Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi
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9Assessing the microbial diversity in Cape Comorin ocean water
-
4916S data describing Antarctic benthic sediment
-
28surface sediment Raw sequence reads
-
29Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
-
2Sediment saline lake Grevelingen (Netherlands) Raw sequence reads
-
23Surface sediment of Yellow Sea, Bohai Sea and north East China Sea Metagenome
-
7marine metagenome
-
827Response of soil bacteria to anthropogenic soil variables at large spatial scales
-
5ETNP Targeted Locus (Loci)
-
7Island Metagenome
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915N methylamine SIP (WCO station L4)
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5Stratification of anaerobic methanotrophs in cold-seep sediments
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4Raw sequence reads
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8Pyrosequencing, the South Sea, May 2009
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159estuary metagenome Raw sequence reads
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10Dissolved compounds excreted by copepods reshape the diversity and the activity of marine bacterioplankton community
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27Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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6Eastern offshore environmental monitoring of Krishna Godavari Basin Bay of Bengal 2013-2016, Funded by: ONGC India
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2616S rDNA sequencing
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7Global phylogeography survey of thermophilic spores in marine sediments.
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16Cataloging the Microbial Diversity of Sundarbans in the Backdrop of Climate Change
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8Prokaryotic community structure in the deep Southwest Indian Ocean with an emphasis on actinobacteria Targeted Locus (Loci)
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124Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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12Microbial communities in marine surface water
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2Bacterial ecology of sponges from Irish Waters
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1Spatial Variation of Coastal Bacterioplankton Community along a Nitrogen and Phosphorus Co-pollution Gradient
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36Phaeobacter inhibens host-attached and free-living communities
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91Sea spray aerosols at Three California Beaches
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4Southern Ocean microorganisms Targeted Locus (Loci)
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5PCB-contaminated sediment Genome sequencing
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7Southern Ocean
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5Ocean Acidification baceria sample Targeted loci environmental
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2uncultured prokaryote Raw sequence reads
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516S rRNA genes Random survey
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11Ocean Water Metagenome
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2Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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2Archaea 16S 01-13 Genome sequencing and assembly
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68E1 Targeted Locus (Loci)
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15microbes in coastal sea
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43Microbial biogeography of French caves
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49Caspian Sea Sediment - 16S Survey Targeted Locus (Loci)
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7Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding
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2Benthic microbial communities in the sediments of the Southern Ocean
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6Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation
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123Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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2kNahant Collection
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46aquatic bacterial metagenome Raw sequence reads
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130Marine (Aarhus) and freshwater (Lake Constance) sediment Raw sequence reads
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2rDNA amplicon sequencing of Western North Atlantic microbial community
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56Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea
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3Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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4marine sediment metagenome Targeted loci environmental
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14Uncultured Microbial Consortia in Industrialized Sites on Egypt''s Red Sea Coast Targeted loci environmental
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122Heterogeneity of methane seep microbiomes in the NE Pacific
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5Mediterranean mud volcano flow Targeted loci
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2Japan Collection of Microorganisms, RIKEN BioResource Center
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1Sequences obtained from two sponge genera (Hyrtios, Aiolochroia), one zoanthid (Palythoa), and marine sediments. Metagenome
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2marine sediment metagenome Targeted loci environmental
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2South China Sea interfaces 16S amplicon sequencing
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14Bacterial population dynamics in a natural assemblage upon the addition of artificial alginate particles and alginolytic Alteromonas macleodii
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11Marine sediment metagenome
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5Eastern Mediterranean Sea Lignin and Xylan enrichments
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9Ice Wedge Polygon
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50Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem
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502uncultured prokaryote Targeted loci environmental
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2Deep mud-volcano biosphere in the Nankai accretionary wedge
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1Microbial Community Diversity Response to a Changing Arctic Ocean
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21Antimony contaminated sediments Raw sequence reads
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8Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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5water Raw sequence reads
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6ZRU sediment metagenome Metagenome
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14estuary metagenome Raw sequence reads
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19MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer
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2Gulf of Mexico Alkane Reactors Metagenome
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1There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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2Copepod induced bacterial community Raw sequence reads
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3Sundarbans estuarine ecosystem Metagenome
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4Baltic Expression Project
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37Bacterial community structure and their predicted functions in coastal sediments
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54Microbial communities in the ocean Raw sequence reads
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26Artificial stream sediment raw sequence reads
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6Community structure of Archaea in the western North Pacific and the Arctic Ocean
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33marine sediment metagenome Targeted loci environmental
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22Sediment bacterial diversity
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29Microbial diversity in benthic stream sediment
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11Antarctic Hypersaline Brine Raw sequence reads
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5Uncultered bacterium Targeted Locus (Loci)
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4Bacteria of the genus Endozoicomonas dominate the microbial communities of the Mediterranean gorgonian soft coral Eunicella cavolini
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5DSMZ Prokarya Collection Catalogue
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26marine metagenome Metagenome