Western Antarctic Peninsula Bacteria (Mesocosm exp.)
Citation
Luria C, Amaral-Zettler L, Ducklow H, Repeta D, Rhyne A, Rich J, Sweetlove M (2019). Western Antarctic Peninsula Bacteria (Mesocosm exp.). Version 1.4. SCAR - Microbial Antarctic Resource System. Metadata dataset https://doi.org/10.15468/lebdhj accessed via GBIF.org on 2020-05-25.Description
Amplicon sequencing data of the 16S SSU rRNA marker gene of bacteria in four Mesososm experiments that spanned the spring transitional period (August–December 2013) in surface waters of the Western Antarctic Peninsula (WAP). Each mesocosm consisted of nearshore surface seawater (50 L) incubated in the laboratory for 10 days. Further details in: Luria, C. M., Amaral-Zettler, L. A., Ducklow, H. W., Repeta, D. J., Rhyne, A. L., & Rich, J. J. (2017). Seasonal shifts in bacterial community responses to phytoplankton-derived dissolved organic matter in the Western Antarctic Peninsula. Frontiers in microbiology, 8, 2117.Sampling Description
Study Extent
Western Antarctic PeninsulaSampling
Mesocosms were set up at Palmer Station, Antarctica, using seawater from the station’s intake, located at a depth of 6 m, 16 m from the shore of the station. This source water was monitored during the experimental period (August–December 2013) to determine any changes in environmental parameters that might influence bacterial community responses in mesocosm experiments. Samples for dissolved nutrients (phosphate, silicate, nitrite, and nitrate) and particulate organic carbon and nitrogen (POC and PN) were processed according to Palmer LTER standard protocolsMethod steps
- Mesocosms were set up at Palmer Station, Antarctica, using seawater from the station’s intake, located at a depth of 6 m, 16 m from the shore of the station. This source water was monitored during the experimental period (August–December 2013) to determine any changes in environmental parameters that might influence bacterial community responses in mesocosm experiments. Samples for dissolved nutrients (phosphate, silicate, nitrite, and nitrate) and particulate organic carbon and nitrogen (POC and PN) were processed according to Palmer LTER standard protocols
Taxonomic Coverages
Bacteria (16S ssu rRNA gene, v6 region)
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Bacteriacommon name: Bacteria rank: domain
Geographic Coverages
Sea off the Western Antarctic Peninsula
Bibliographic Citations
- Luria, C. M., Amaral-Zettler, L. A., Ducklow, H. W., Repeta, D. J., Rhyne, A. L., & Rich, J. J. (2017). Seasonal shifts in bacterial community responses to phytoplankton-derived dissolved organic matter in the Western Antarctic Peninsula. Frontiers in microbiology, 8, 2117. -
Contacts
Catherine Luriaoriginator
Brown University
US
Linda Amaral-Zettler
originator
Royal Netherlands Institute for Sea Research
NL
Hugh Ducklow
originator
Lamont-Doherty Earth Observatory
US
Daniel Repeta
originator
Woods Hole Oceanographic Institution
Woods Hole
US
Andrew Rhyne
originator
Roger Williams University
Bristol
US
Jeremy Rich
originator
University of Maine
Walpole
US
Maxime Sweetlove
metadata author
position: Assistent researcher
Royal Belgian Institude of Natural Sciences
Rue Vautier 29
Brussels
1000
BE
email: msweetlove@naturalsciences.be
Linda Amaral-Zettler
administrative point of contact
Royal Netherlands Institute for Sea Research
NL
Jeremy Rich
administrative point of contact
University of Maine
193 Clarks Cove Road
Walpole
04573
US