Peer-reviewed publications using GBIF-mediated data to assist research relating to agriculture, biofuels, aquaculture and wild fisheries.

70 publications for Agriculture

  • Ramirez-Cabral N, Kumar L, Taylor S (2016)

    Crop niche modeling projects major shifts in common bean growing areas

    Agricultural and Forest Meteorology 218-219 102-113.

    Crops experience different climate stresses during development. The magnitude of damage will depend on the phenological stage of the crop and the stress duration. Climate change could intensify some or all of these stresses, thus negatively impacting agriculture. An assessment of staple crop productivity, quality and climatically suitable areas under climate change conditions is necessary to undertake any global initiatives to tackle food security issues. The common bean (Phaseolus vulgaris L.) is a staple crop and the main source of proteins and nutrients in Africa and Latin America. The...

    Keywords: Abiotic stresses, Agriculture suitability, CLIMEX, Climate change, Phaseolus vulgaris L.

  • Bunn C, Läderach P, Pérez Jimenez J, Montagnon C, Schilling T (2015)

    Multiclass Classification of Agro-Ecological Zones for Arabica Coffee: An Improved Understanding of the Impacts of Climate Change.

    PloS one 10(10) e0140490.

    Cultivation of Coffea arabica is highly sensitive to and has been shown to be negatively impacted by progressive climatic changes. Previous research contributed little to support forward-looking adaptation. Agro-ecological zoning is a common tool to identify homologous environments and prioritize research. We demonstrate here a pragmatic approach to describe spatial changes in agro-climatic zones suitable for coffee under current and future climates. We defined agro-ecological zones suitable to produce arabica coffee by clustering geo-referenced coffee occurrence locations based on bio-...

    Keywords: Abiotic stresses, Agriculture suitability, CLIMEX, Climate change, Phaseolus vulgaris L.

  • Castañeda-Álvarez N, de Haan S, Juárez H, Khoury C, Achicanoy H, Sosa C et al. (2015)

    Ex situ conservation priorities for the wild relatives of potato (solanum L. Section petota).

    PloS one 10(4) e0122599.

    Crop wild relatives have a long history of use in potato breeding, particularly for pest and disease resistance, and are expected to be increasingly used in the search for tolerance to biotic and abiotic stresses. Their current and future use in crop improvement depends on their availability in ex situ germplasm collections. As these plants are impacted in the wild by habitat destruction and climate change, actions to ensure their conservation ex situ become ever more urgent. We analyzed the state of ex situ conservation of 73 of the closest wild relatives of potato (Solanum section Petota)...

    Keywords: Abiotic stresses, Agriculture suitability, CLIMEX, Climate change, Phaseolus vulgaris L.

  • Galluzzi G, Dufour D, Thomas E, van Zonneveld M, Escobar Salamanca A, Giraldo Toro A et al. (2015)

    An Integrated Hypothesis on the Domestication of Bactris gasipaes.

    PloS one 10(12) e0144644.

    Peach palm (Bactris gasipaes Kunth) has had a central place in the livelihoods of people in the Americas since pre-Columbian times, notably for its edible fruits and multi-purpose wood. The botanical taxon includes both domesticated and wild varieties. Domesticated var gasipaes is believed to derive from one or more of the three wild types of var. chichagui identified today, although the exact dynamics and location of the domestication are still uncertain. Drawing on a combination of molecular and phenotypic diversity data, modeling of past climate suitability and existing literature, we...

    Keywords: Abiotic stresses, Agriculture suitability, CLIMEX, Climate change, Phaseolus vulgaris L.

  • Khoury C, Heider B, Castañeda-Álvarez N, Achicanoy H, Sosa C, Miller R et al. (2015)

    Distributions, ex situ conservation priorities, and genetic resource potential of crop wild relatives of sweetpotato [Ipomoea batatas (L.) Lam., I. series Batatas].

    Frontiers in plant science 6 251.

    Crop wild relatives of sweetpotato [Ipomoea batatas (L.) Lam., I. series Batatas] have the potential to contribute to breeding objectives for this important root crop. Uncertainty in regard to species boundaries and their phylogenetic relationships, the limited availability of germplasm with which to perform crosses, and the difficulty of introgression of genes from wild species has constrained their utilization. Here, we compile geographic occurrence data on relevant sweetpotato wild relatives and produce potential distribution models for the species. We then assess the comprehensiveness of...

    Keywords: Crop Improvement, Crop diversity, Crop wild relatives, Food security, Gap analysis, Plant Genetic Resources

  • Kriticos D, Brunel S, Ota N, Fried G, Oude Lansink A, Panetta F et al. (2015)

    Downscaling Pest Risk Analyses: Identifying Current and Future Potentially Suitable Habitats for Parthenium hysterophorus with Particular Reference to Europe and North Africa

    PLOS ONE 10(9) e0132807.

    Pest Risk Assessments (PRAs) routinely employ climatic niche models to identify endangered areas. Typically, these models consider only climatic factors, ignoring the ‘Swiss Cheese’ nature of species ranges due to the interplay of climatic and habitat factors. As part of a PRA conducted for the European and Mediterranean Plant Protection Organization, we developed a climatic niche model for Parthenium hysterophorus, explicitly including the effects of irrigation where it was known to be practiced. We then downscaled the climatic risk model using two different methods to identify the suitable...

    Keywords: Crop Improvement, Crop diversity, Crop wild relatives, Food security, Gap analysis, Plant Genetic Resources

  • Magwé-Tindo J, Zapfack L, Sonké B (2015)

    Diversity of wild yams (Dioscorea spp., Dioscoreaceae) collected in continental Africa

    Biodiversity and Conservation.

    Plant genetic resources, especially crop wild relatives like wild yams, are under high risks of extinction due to habitat loss, climate change, unacceptable collection practices, shifting cultivation practice and over-exploitation. To contribute to their conservation, the diversity of wild yams (Dioscorea spp.) collected in continental Africa was analyzed. Specimens from Herbaria (B, BR, K, P, WAG and YA), databases, literature and actual collection from Cameroon were considered. The collection localities were georeferenced and projected to Lambert azimuthal equal-area projection. Spatial...

    Keywords: Conservation, Diversity indices, Floristic similarity, Georeferencing, Herbarium specimens

  • Moreira P, Lins J, Dequigiovanni G, Veasey E, Clement C (2015)

    The Domestication of Annatto (Bixa orellana) from Bixa urucurana in Amazonia

    Economic Botany 69(2) 127-135.

    Annatto (Bixa orellana) is an important colorant domesticated in the Neotropics, although it is not clear where or from which wild populations. We reviewed the available biological, archaeological, and ethnographic information about annatto, and integrated this with our recent ethnobotanical observations of cultivated and non–cultivated populations in order to evaluate the hypothesis that what is classified as Bixa urucurana is the wild ancestor of cultivated annatto, Bixa orellana. Most B. urucurana populations we found in Amazonia occurred in open forests or anthropogenic landscapes,...

    Keywords: Ethnobotany, archaeology, domestication syndrome, taxonomy

  • Paterson R, Kumar L, Taylor S, Lima N (2015)

    Future climate effects on suitability for growth of oil palms in Malaysia and Indonesia

    Scientific Reports 5 14457.

    The production of palm oil (PO) is highly profitable. The economies of the principal producers, Malaysia and Indonesia, and others, benefit considerably. Climate change (CC) will most likely have an impact on the distribution of oil palms (OP) (Elaeis guineensis). Here we present modelled CC projections with respect to the suitability of growing OP, in Malaysia and Indonesia. A process-oriented niche model of OP was developed using CLIMEX to estimate its potential distribution under current and future climate scenarios. Two Global Climate Models (GCMs), CSIRO-Mk3.0 and MIROC-H, were used to...

    Keywords: Ethnobotany, archaeology, domestication syndrome, taxonomy

  • Wagner N, Mingo V, Schulte U, Lötters S (2015)

    Risk evaluation of pesticide use to protected European reptile species

    Biological Conservation 191 667-673.

    Environmental contamination is supposed to be a reason for population declines in reptiles. Especially intensification and expansion of agriculture are leading to increased pesticide exposure risks for wildlife. In the European Union, Special Areas of Conservation (SACs) have been established for the conservation of taxa listed in Annex II of the Habitats Directive. In the SACs, agricultural land use is legal. Therefore, we conducted a risk evaluation of pesticide exposure for Annex II reptiles by calculating proportions of land use with regular pesticide applications within SACs. Using three...

    Keywords: Fungicide, Habitats Directive, Herbicide, IUCN Red List of Threatened Species, Insecticide, Management plan, Special Areas of Conservation