For all researches, please visit our "Peer-reviewed publications" page.
Trujillo-Arias N, Dantas G, Arbeláez-Cortés E, Naoki K, Gómez M, Santos F et al. (2017)
The niche and phylogeography of a passerine reveal the history of biological diversification between the Andean and the Atlantic forests
Molecular Phylogenetics and Evolution.
The Atlantic Forest is separated from the Andean tropical forest by dry and open vegetation biomes (Chaco and Cerrado). Despite this isolation, both rainforests share closely related lineages, which suggest a past connection. This connection could have been important for forest taxa evolution. In this study, we used the Saffron-billed Sparrow (Arremon flavirostris) as a model to evaluate whether the Andean and the Atlantic forests act as a refugia system, as well as to test for a history of biogeographic connection between them. In addition, we evaluated the molecular systematic of intraspecific lineages of the studied species. We modeled the current and past distribution of A. flavirostris, performed phylogeographic analyses based on mitochondrial and nuclear genes, and used Approximate Bayesian Computation (ABC) analyses to test for biogeographic scenarios. The major phylogeographic disjunction within A. flavirostris was found between the Andean and the Atlantic forests, with a divergence that occurred during the Mid-Pleistocene. Our paleodistribution models indicated a connection between these forest domains in different periods and through both the Chaco and Cerrado. Additionally, the phylogeographic and ABC analyses supported that the Cerrado was the main route of connection between these rainforests, but without giving decisive evidence against a Chaco connection. Our study with A. flavirostris suggest that the biodiversity of the Andean and of the Atlantic forests could have been impacted (and perhaps enriched?) by cycles of connections through the Cerrado and Chaco. This recurrent cycle of connection between the Andean and the Atlantic Forest could have been important for the evolution of Neotropical forest taxa. In addition, we discussed taxonomic implications of the results and proposed to split the studied taxon into two full species.
Keywords: Andean forest, Approximate Bayesian Computation, Atlantic Forest, Cerrado, Chaco, gallery forests
Cadena E, Anaya F, Croft D (2015)
Giant fossil tortoise and freshwater chelid turtle remains from the middle Miocene, Quebrada Honda, Bolivia: Evidence for lower paleoelevations for the southern Altiplano
Journal of South American Earth Sciences 64 190-198.
We describe the first Miocene turtle remains from Bolivia, which were collected from the late middle Miocene (13.18–13.03 Ma) of Quebrada Honda, southern Bolivia. This material includes a large scapula-acromion and fragmentary shell elements conferred to the genus Chelonoidis (Testudinidae), and a left xiphiplastron from a pleurodire or side-necked turtle, conferred to Acanthochelys (Chelidae). The occurrence of a giant tortoise and a freshwater turtle suggests that the paleoelevation of the region when the fossils were deposited was lower than has been estimated by stable isotope proxies, with a maximum elevation probably less than 1000 m. At a greater elevation, cool temperatures would have been beyond the tolerable physiological limits for these turtles and other giant ectotherm reptiles.
Keywords: Altiplano, Bolivia, Chelidae, Miocene, Paleoelevation, Testudinidae, Turtles
Cuyckens G, Christie D, Domic A, Malizia L, Renison D (2015)
Climate change and the distribution and conservation of the world’s highest elevation woodlands in the South American Altiplano
Global and Planetary Change.
Climate change is becoming an increasing threat to biodiversity. Consequently, methods for delineation, establishment and management of protected areas must consider the species’ future distribution in response to future climate conditions. Biodiversity in high altitude semiarid regions may be particularly threatened by future climate change. In this study we assess the main environmental variables that best explain present day presence of the world’s highest elevation woodlands in the South American Altiplano, and model how climate change may affect the future distribution of this unique ecosystem under different climate change scenarios. These woodlands are dominated by Polylepis tarapacana (Rosaceae), a species that forms unique biological communities with important conservation value. Our results indicate that five environmental variables are responsible for 91% and 90.3% of the present and future P. tarapacana distribution models respectively, and suggest that at the end of the 21st century, a significant reduction (56%) in the potential habitat for this species due to more arid conditions. Since it is predicted that P. tarapacana’s potential distribution will be severely reduced in the future, we propose a new network of national protected areas across this species distribution range in order to insure the future conservation of this unique ecosystem. Based on an extensive literature review we identify research topics and recommendations for on-ground conservation and management of P. tarapacana woodlands.
Keywords: MaxEnt, Polylepis tarapacana, models, potential distribution
Fernández M, Navarro L, Apaza-Quevedo A, Gallegos S, Marques A, Zambrana-Torrelio C et al. (2015)
Pragmatic methods to assess the status of biodiversity at multiple scales are required to support conservation decision-making. At the intersection of several major biogeographic zones, Bolivia has extraordinary potential to develop a monitoring strategy aligned with the objectives of the Group on Earth Observations Biodiversity Observation Network (GEO BON). Bolivia, a GEO Observer since 2005, is already working on the adequacy of national earth observations towards the objectives of the Global Earth Observation System of Systems (GEOSS). However, biodiversity is still an underrepresented component in this initiative. The integration of biodiversity into Bolivia’s GEO framework would confirm the need for a country level biodiversity monitoring strategy, fundamental to assess the progress towards the 2020 Aichi targets. Here we analyse and discuss two aspects of the process of developing such a strategy: (1) identification of taxonomic, temporal and spatial coverage of biodiversity data to detect both ava...
Keywords: Bolivia, GEO BON, baseline, big data integration, biodiversity, monitoring
Peñaranda D, Simonetti J (2015)
Predicting and setting conservation priorities for Bolivian mammals based on biological correlates of the risk of decline
Conservation Biology n/a-n/a.
The recognition that growing proportions of species worldwide are endangered has led to the development of comparative analyses to elucidate why some species are more prone to extinction than others. Understanding factors and patterns of species vulnerability might provide an opportunity to develop proactive conservation strategies. Such comparative analyses are of special concern at national scales because this is the scale at which most conservation initiatives take place. We applied powerful ensemble learning models to test for biological correlates of the risk of decline among the Bolivian mammals to understand species vulnerability at a national scale and to predict the population trend for poorly known species. Risk of decline was nonrandomly distributed: higher proportions of large-sized taxa were under decline, whereas small-sized taxa were less vulnerable. Body mass, mode of life (i.e., aquatic, terrestrial, volant), geographic range size, litter size, home range, niche specialization, and reproductive potential were strongly associated with species vulnerability. Moreover, we found interacting and nonlinear effects of key traits on the risk of decline of mammals at a national scale. Our model predicted 35 data-deficient species in decline on the basis of their biological vulnerability, which should receive more attention in order to prevent their decline. Our results highlight the relevance of comparative analysis at relatively narrow geographical scales, reveal previously unknown factors related to species vulnerability, and offer species-by-species outcomes that can be used to identify targets for conservation, especially for insufficiently known species. Predección y Definición de Prioridades de Conservación para Mamíferos de Bolivia con Base en Correlaciones Biológicas del Riesgo de Declinación.
Keywords: bosque aleatorio, extinción, extinction, modelado predictivo, population trend, predictive modeling, random forest, species vulnerability, tendencia poblacional, vulnerabilidad de especies
Cadima X, van Zonneveld M, Scheldeman X, Castañeda N, Patiño F, Beltran M et al. (2014)
Endemic wild potato (Solanum spp.) biodiversity status in Bolivia: Reasons for conservation concerns
Journal for Nature Conservation 22(2) 113-131.
Crop wild relatives possess important traits, therefore ex situ and in situ conservation efforts are essential to maintain sufficient options for crop improvement. Bolivia is a centre of wild relative diversity for several crops, among them potato, which is an important staple worldwide and the principal food crop in this country. Despite their relevance for plant breeding, limited knowledge exists about their in situ conservation status. We used Geographic Information Systems (GIS) and distribution modelling with the software Maxent to better understand geographic patterns of endemic wild potato diversity in Bolivia. In combination with threat layers, we assessed the conservation status of all endemic species, 21 in total. We prioritised areas for in situ conservation by using complementary reserve selection and excluded 25% of the most-threatened collection sites because costs to implement conservation measures at those locations may be too high compared to other areas. Some 70% (15 of 21 species) has a preliminary vulnerable status or worse according to IUCN red list distribution criteria. Our results show that four of these species would require special conservation attention because they were only observed in <15 locations and are highly threatened by human accessibility, fires and livestock pressure. Although highest species richness occurs in south-central Bolivia, in the departments Santa Cruz and Chuquisaca, the first priority area for in situ conservation according to our reserve selection exercise is central Bolivia, Cochabamba; this area is less threatened than the potato wild relatives’ hotspot in south-central Bolivia. Only seven of the 21 species were observed in protected areas. To improve coverage of potato wild relatives’ distribution by protected areas, we recommend starting inventories in parks and reserves with high modelled diversity. Finally, to improve ex situ conservation, we targeted areas for germplasm collection of species with <5 accessions conserved in genebanks.
Keywords: Crop wild relatives, Ex situ conservation, IUCN red listing, In situ conservation, Potato breeding material, Reserve selection, Species distribution modelling, Threat assessment
Velez–Liendo X, Strubbe D, Matthysen E (2014)
Effects of variable selection on modelling habitat and potential distribution of the Andean bear in Bolivia
Ursus 24(2) 127-138.
Species distribution models are used in ecology and conservation biology to draw inferences about the drivers of species’ ranges. However, poor conceptual background, environmental variable selection, and algorithm selection can contribute to misleading model predictions. We assessed the effects of environment variable selection and compared statistical performance and output maps of correlative resource- and biotope-based models for estimating the habitat and potential distribution of the Andean bear (Tremarctos ornatus) in Bolivia’s Tropical Andes. The resource-based approach estimated bear habitat using 7 resources associated with 3 ecological functions: feeding, shelter, and access to water. In contrast, the biotope model described the habitat by applying 11 environmental predictors related to topography, vegetation, and human activities. Both models performed equally well overall and better than random, with shelter as the most influential variable for the resource model and Yunga forest for the biotope model. However, discrepancies in the extent and arrangement of predicted bear distribution between models differed and emphasized the effect of variable selection, which could influence the delineation of conservation areas for this species. We suggest using a resource-based approach when modelling species distribution because of the more direct relationship to the species investigated and greater ease of interpreting results.
Keywords: Andean bears, Bolivia, Tremarctos ornatus, species distribution modelling, variable selection